Zobrazeno 1 - 10
of 14
pro vyhledávání: '"Allison Pon"'
Autor:
Yannick Djoumbou-Feunang, Allison Pon, Naama Karu, Jiamin Zheng, Carin Li, David Arndt, Maheswor Gautam, Felicity Allen, David S. Wishart
Publikováno v:
Metabolites, Vol 9, Iss 4, p 72 (2019)
Metabolite identification for untargeted metabolomics is often hampered by the lack of experimentally collected reference spectra from tandem mass spectrometry (MS/MS). To circumvent this problem, Competitive Fragmentation Modeling-ID (CFM-ID) was de
Externí odkaz:
https://doaj.org/article/615de7509d534f90ba45aa205d3a2b56
Autor:
David S. Wishart, Maïlys Paccoud, Christopher Chan, Hasan Badran, Xuan Cao, William Wei, Krissa Li, Allison Pon, Jonas Patron, Miguel Ramirez-Gaona, Debra Lipton, Carin Li, Eponine Oler, An Chi Guo, Zachary Budinski, Chelsea Hong, Ana Marcu
Publikováno v:
Nucleic acids research 48 (2020) D1
Nucleic acids research, 48(D1), D470-D478
Nucleic Acids Research
Nucleic acids research, 48(D1), D470-D478
Nucleic Acids Research
PathBank (www.pathbank.org) is a new, comprehensive, visually rich pathway database containing more than 110 000 machine-readable pathways found in 10 model organisms (Homo sapiens, Bos taurus, Rattus norvegicus, Mus musculus, Drosophila melanogaster
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8912a30db15062f882d9db6bf1014abd
https://research.wur.nl/en/publications/pathbank-a-comprehensive-pathway-database-for-model-organisms
https://research.wur.nl/en/publications/pathbank-a-comprehensive-pathway-database-for-model-organisms
Autor:
Carin Li, Adam Maciejewski, Allison Pon, Ryan Cummings, Nicola Gale, Ana Marcu, Yannick Djoumbou Feunang, Alex Wilson, Zinat Sayeeda, Ithayavani Iynkkaran, Diana Le, David S. Wishart, An Chi Guo, Craig Knox, Lucy Chin, Tanvir Sajed, Nazanin Assempour, Jason R. Grant, Yifeng Liu, Elvis J. Lo, Michael Wilson, Daniel Johnson
Publikováno v:
Nucleic Acids Research
DrugBank (www.drugbank.ca) is a web-enabled database containing comprehensive molecular information about drugs, their mechanisms, their interactions and their targets. First described in 2006, DrugBank has continued to evolve over the past 12 years
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::15200ad8c3a04bd1ea9f1b504d5b1d75
https://doi.org/10.1093/nar/gkx1037
https://doi.org/10.1093/nar/gkx1037
Autor:
David Arndt, Carin Li, Felicity Allen, David S. Wishart, Jiamin Zheng, Allison Pon, Naama Karu, Yannick Djoumbou-Feunang, Maheswor Gautam
Publikováno v:
Metabolites, Vol 9, Iss 4, p 72 (2019)
Metabolites
Volume 9
Issue 4
Metabolites
Volume 9
Issue 4
Metabolite identification for untargeted metabolomics is often hampered by the lack of experimentally collected reference spectra from tandem mass spectrometry (MS/MS). To circumvent this problem, Competitive Fragmentation Modeling-ID (CFM-ID) was de
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::557a2c12bf10ec4005398523136d26d3
https://www.mdpi.com/2218-1989/9/4/72
https://www.mdpi.com/2218-1989/9/4/72
Autor:
Noah A. Wishart, Allison Pon, Miguel Ramirez-Gaona, Tanvir Sajed, David S. Wishart, An Chi Guo, Ana Marcu, Naama Karu, Yannick Djoumbou Feunang, David Arndt
Publikováno v:
Nucleic Acids Research
YMDB or the Yeast Metabolome Database (http://www.ymdb.ca/) is a comprehensive database containing extensive information on the genome and metabolome of Saccharomyces cerevisiae. Initially released in 2012, the YMDB has gone through a significant exp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::84da5b7d0d676bccc3237db9bbf42439
https://doi.org/10.1093/nar/gkw1058
https://doi.org/10.1093/nar/gkw1058
Autor:
David S. Wishart, Héloïse Rouaix, Vanessa Neveu, Craig Knox, Allison Pon, Alice Moussy, Augustin Scalbert, Roland Wedekind
Publikováno v:
Nucleic Acids Research
Exposome-Explorer (http://exposome-explorer.iarc.fr) is the first database dedicated to biomarkers of exposure to environmental risk factors. It contains detailed information on the nature of biomarkers, their concentrations in various human biospeci
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e3693a42766dae3c9670cb9df1ea63fe
http://europepmc.org/articles/PMC5210656
http://europepmc.org/articles/PMC5210656
Autor:
Yongjie Liang, David S. Wishart, David Arndt, Ana Marcu, Jason R. Grant, Tanvir Sajed, Allison Pon
Publikováno v:
Nucleic Acids Research
PHASTER (PHAge Search Tool - Enhanced Release) is a significant upgrade to the popular PHAST web server for the rapid identification and annotation of prophage sequences within bacterial genomes and plasmids. Although the steps in the phage identific
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::204b6dba960dac6fdfd42b4cc2352b83
http://europepmc.org/articles/PMC4987931
http://europepmc.org/articles/PMC4987931
Autor:
Allison Pon, Carin Li, Zinat Sayeeda, An Chi Guo, Craig Knox, Hasan Badran, David Arndt, Vanessa Neveu, Mark V. Berjanskii, Kevin Y. H. Liang, Yannick Djoumbou Feunang, Augustin Scalbert, Naama Karu, Claudine Manach, Rosa Vázquez-Fresno, Arnau Serra-Cayuela, Jason R. Grant, Ana Marcu, Sandeep Singhal, Yongjie Liang, Rupa Mandal, Nazanin Assempour, Yifeng Liu, David S. Wishart, Elvis J. Lo, Michael Wilson, Daniel Johnson, Tanvir Sajed
Publikováno v:
Nucleic Acids Research
Nucleic Acids Research, Oxford University Press, 2018, 46 (D1), pp.D608-D617. ⟨10.1093/nar/gkx1089⟩
Nucleic Acids Research D1 (46), D608-D617. (2018)
Nucleic Acids Research, 2018, 46 (D1), pp.D608-D617. ⟨10.1093/nar/gkx1089⟩
Nucleic Acids Research, Oxford University Press, 2018, 46 (D1), pp.D608-D617. ⟨10.1093/nar/gkx1089⟩
Nucleic Acids Research D1 (46), D608-D617. (2018)
Nucleic Acids Research, 2018, 46 (D1), pp.D608-D617. ⟨10.1093/nar/gkx1089⟩
The Human Metabolome Database or HMDB (www.hmdb.ca) is a web-enabled metabolomic database containing comprehensive information about human metabolites along with their biological roles, physiological concentrations, disease associations, chemical rea
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f79b6c6e34404d84dc7341241160ff8e
https://hal.archives-ouvertes.fr/hal-01712873
https://hal.archives-ouvertes.fr/hal-01712873
Publikováno v:
Journal of Visualized Experiments : JoVE
PathWhiz is a web server built to facilitate the creation of colorful, interactive, visually pleasing pathway diagrams that are rich in biological information. The pathways generated by this online application are machine-readable and fully compatibl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::367870f95df40508af8010b741a6485d
https://doi.org/10.3791/54869-v
https://doi.org/10.3791/54869-v
Autor:
Yifeng Liu, Jason R. Grant, David S. Wishart, Michael Wilson, Craig Knox, Yongjie Liang, Yannick Djoumbou, David Arndt, Tanvir Sajed, Seyed Ali Goldansaz, An Chi Guo, Allison Pon, Stephen M. Rappaport
Publikováno v:
Nucleic Acids Research
The exposome is defined as the totality of all human environmental exposures from conception to death. It is often regarded as the complement to the genome, with the interaction between the exposome and the genome ultimately determining one's phenoty
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::38c8179ba55aeed1f29ef13f4fd18a52
https://doi.org/10.1093/nar/gku1004
https://doi.org/10.1093/nar/gku1004