Zobrazeno 1 - 10
of 51
pro vyhledávání: '"Allison Heath"'
Autor:
Yiran Guo, Qi Li, Jared Rozowsky, Jeremy Costanza, Michele Mattioni, Jean-Philippe Thibert, Miguel Brown, David Higgins, Yuankun Zhu, Allison Heath, Adam Resnick, Vincent Ferretti
Publikováno v:
Genetics in Medicine Open, Vol 2, Iss , Pp 101743- (2024)
Externí odkaz:
https://doaj.org/article/876240f704ec4555aa1d89f67a7a06bf
Autor:
Zhenyu Zhang, Kyle Hernandez, Jeremiah Savage, Shenglai Li, Dan Miller, Stuti Agrawal, Francisco Ortuno, Louis M. Staudt, Allison Heath, Robert L. Grossman
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-11 (2021)
The Genomic Data Commons repository contains genomic, epigenomic, proteomic and clinical data from the TCGA and TARGET datasets. Here, the authors describe the analysis methods for how these divergent datasets were integrated together.
Externí odkaz:
https://doaj.org/article/6b96ad04560f436984a85fdec0836132
Autor:
Robert L. Grossman, Vincent Ferretti, Junjun Zhang, Christine Yu, Zhining Wang, Yajing Tang, Louis Staudt, Himanso Sahni, James Porter, Mark W. Murphy, Josh Miller, Mark Jensen, Allison Heath, Martin Ferguson, Michael Fitzsimons, Shane Wilson
This video gives an overview of the GDC Application Programming Interface (API), which makes available to third party applications all of the data available in the GDC.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5769fdb234cb68c731c18e832261a3d8
https://doi.org/10.1158/0008-5472.22418958.v1
https://doi.org/10.1158/0008-5472.22418958.v1
Autor:
Robert L. Grossman, Vincent Ferretti, Junjun Zhang, Christine Yu, Zhining Wang, Yajing Tang, Louis Staudt, Himanso Sahni, James Porter, Mark W. Murphy, Josh Miller, Mark Jensen, Allison Heath, Martin Ferguson, Michael Fitzsimons, Shane Wilson
The NCI Genomic Data Commons (GDC) was launched in 2016 and makes available over 4 petabytes (PB) of cancer genomic and associated clinical data to the research community. This dataset continues to grow and currently includes over 14,500 patients. Th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::6e8603aa112b64d11e506ffdd28aeb01
https://doi.org/10.1158/0008-5472.c.6510264.v1
https://doi.org/10.1158/0008-5472.c.6510264.v1
Autor:
Ino de Bruijn, Tali Mazor, Adam Abeshouse, Diana Baiceanu, Stephanie Carrero, Elena Garcia Lara, Benjamin Gross, David M. Higgins, Prasanna K. Jagannathan, Priti Kumari, Ritika Kundra, Bryan Lai, Xiang Li, James Lindsay, Aaron Lisman, Divya Madala, Ramyasree Madupuri, Angelica Ochoa, Yusuf Ziya Özgül, Oleguer Plantalech, Sander Rodenburg, Baby Anusha Satravada, Robert Sheridan, Lucas Sikina, Jessica Singh, S Onur Sumer, Yichao Sun, Pim van Nierop, Avery Wang, Manda Wilson, Hongxin Zhang, Gaofei Zhao, Sjoerd van Hagen, Ugur Dogrusoz, Allison Heath, Adam Resnick, Trevor J. Pugh, Chris Sander, Ethan Cerami, Jianjiong Gao, Nikolaus Schultz
Publikováno v:
Cancer Research. 83:4256-4256
cBioPortal for Cancer Genomics is an open-source platform for interactive, exploratory analysis of large-scale clinico-genomic data sets. cBioPortal provides a suite of user-friendly visualizations and analyses, including OncoPrints, mutation “loll
Autor:
Raymond Powell, Phuong-My Do, Mark A. Jensen, Tanja Davidsen, Michael S. Fitzsimons, Karl Rademacher, Daniel P. Miller, Ariz Zubair, Christina K. Yung, Francisco M. Ortuño, Stuti Agrawal, Allison Heath, James C. Angelakos, Kim Cullion, Shenglai Li, Yajing Tang, Janice Lodato, Martin L. Ferguson, Gajanan Ganji, Liming Yang, Kang Han, Sid Joshi, Jesús Pedrosa, Lincoln Stein, Zhining Wang, Jeffrey A. Mazzone, Plamen Martinov, Bessie Rogel, Alex Wilmer, Yuanheng Zhao, Vincent Ferretti, Mathangi Thiagarajan, Zhenyu Zhang, Francois Gerthoffert, Koji Miyauchi, Christian Dompierre, Jonathan Spring, Kaman Wu, Laxmi Lolla, Kyle M. Hernandez, Heather D. Troyer, Ian J. Miller, William P. Wysocki, Joseph Sislow, Linda Xiang, Mark W. Murphy, Joshua S. Miller, Jeffrey Burt, James J. Porter, Shane Wilson, Maksim An, Robert L. Grossman, Sean Sullivan, Bilal Baqar, Renuka Arya, Joseph Tadashi Yamada, Daniela S. Gerhard, Miyuki Fukuma, Maxim Y. Popov, Rosita Bajari, Thomas Nullet, Tara M. Lichtenberg, Jeremiah Savage, Tzintzuni Garcia, Fauzi Gomez, Samantha Rich, Louis M. Staudt, Bedford L. West, Ajinkya Kadam, Kyle A. Schmitt, Phuong L. Pham, Richard Jackson, Michael Ford, Sharon Gaheen, Himanso Sahni, Rowland O. Ogwara, Chang Wang, Victoria E. Kraft, Aishmit Khurana, Sameera S. George, Fay Chu, Colin P. Reid, Christine Yu, Jean C. Zenklusen, Ann Catton, Biju Issac, Justin H. B. Barnowski, Kyle M. J. Kim, Brandon F. Chan, Trevar J. Simmons, Junjun Zhang
Publikováno v:
Nature Genetics. 53:257-262
The National Cancer Institute (NCI) Genomic Data Commons (GDC) contains more than 2.9 petabytes of genomic and associated clinical data from more than 60 NCI-funded and other contributed cancer genomics research projects. The GDC consists of five app
Autor:
Batsal Devkota, Michal Kouril, Joseph W. St. Geme, Alba Gutierrez, Simone Temporal, Keith Marsolo, Peter White, Joseph A. Majzoub, Alan Yen, Jaspreet Khanna, Julie Wijesooriya, Mike Furgason, Florence T. Bourgeois, Christopher Geehan, Adda Grimberg, Arnold W. Strauss, Becca Harper, Kristen Safier, Aleksandr Nikitin, Andrew Wooten, Vidhu V Thaker, Deanne Taylor, Ingo Helbig, Darlene Barkman, Anil Kumar Degala, Gelvina Stevenson, Eric D. Marsh, Colin P. Hawkes, Andrew Dauber, Jason Stedman, In-Hee Lee, Andrew M. Rupert, Gary R. Fleisher, Ramkrishna Chakrabarty, Piotr Sliz, Alyssa Ellis, Barbara Hallinan, Kenneth D. Mandl, Susan Kornetsky, Bryan A. Wolf, Philip Dexheimer, Alan H. Beggs, Yu Zhang, Erin M. Borglund, Joel N. Hirschhorn, Andrew Joseph Guidetti, Amy Schwarzhoff, Anna Poduri, Gabor Korodi, Louis J. Muglia, Prakash Velayutham, Christopher P. Kirby, Mike Pistone, Allison Heath, Parth Divekar, Judson Kilbourn, Ranjay Kumar, Guillaume Labilloy, Alka Chandel, Ian D. Krantz, Thomas N DeSain, Kristen L. Sund, Lisa J. Martin, James Morgan, Jeremy Nix, Sawona Biswas, Tracy A. Glauser, Paul Avillach, Sek Won Kong, Niloofar Jalali, Jeremy J. Corsmo, Anna Bartels, Amy Kratchman, Bria Morgan
Publikováno v:
Genetics in Medicine
Purpose Clinicians and researchers must contextualize a patient’s genetic variants against population-based references with detailed phenotyping. We sought to establish globally scalable technology, policy, and procedures for sharing biosamples and
Autor:
Kristi L. Holmes, Meen Chul Kim, Sara Gonzales, Po-Yin Yen, Karen E Gutzman, Guillaume Viger, Robin Champieux, Bailey Farrow, Deanne Taylor, Annie B Wescott, Allison Heath, Lisa Lea O'Keefe
Publikováno v:
Journal of Clinical and Translational Science
Twelve evidence-based profiles of roles across the translational workforce and two patients were made available through clinical and translational science (CTS) Personas, a project of the Clinical and Translational Science Awards (CTSA) Program Natio
Autor:
Jianjiong Gao, Tali Mazor, Ino de Bruijn, Adam Abeshouse, Diana Baiceanu, Ziya Erkoc, Elena Garcia Lara, Benjamin Gross, David M. Higgins, Prasanna K. Jagannathan, Priti Kumari, Ritika Kundra, Xiang Li, James Lindsay, Aaron Lisman, Divya Madala, Ramyasree Madupuri, Angelica Ochoa, Oleguer Plantalech, Sander Rodenburg, Baby A. Satravada, Robert Sheridan, Lucas Sikina, Jessica Singh, S. Onur Sumer, Yichao Sun, Pim van Nierop, Avery Wang, Manda Wilson, Hongxin Zhang, Gaofei Zhao, Sjoerd van Hagen, Kees van Bochove, Ugur Dogrusoz, Allison Heath, Adam Resnick, Trevor J. Pugh, Chris Sander, Ethan Cerami, Nikolaus Schultz
Publikováno v:
Cancer Research. 82:1155-1155
cBioPortal for Cancer Genomics is an open-source platform for interactive, exploratory analysis of large-scale cancer genomics data sets. cBioPortal provides a user-friendly interface that integrates genomic and clinical data, and provides a suite of
Autor:
Yiran Guo, Jeremy Costanza, Christophe Botek, Miguel Brown, David Higgins, Yuankun Zhu, Bailey Farrow, Allison Heath, Adam Resnick, Vincent Ferretti
Publikováno v:
Neuro-Oncology. 24:i157-i157
The Gabriella Miller Kids First Pediatric Research Program (Kids First) aims at facilitating researchers to uncover new insights into the biology of childhood cancer (CC) and structural birth defects (SBD). Kids First has two initiatives, i) whole ge