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Exploring Canine Picornavirus Diversity in the USA Using Wastewater Surveillance: From High-Throughput Genomic Sequencing to Immuno-Informatics and Capsid Structure Modeling

Autor: Temitope O. C. Faleye, Peter Skidmore, Amir Elyaderani, Sangeet Adhikari, Nicole Kaiser, Abriana Smith, Allan Yanez, Tyler Perleberg, Erin M. Driver, Rolf U. Halden, Arvind Varsani, Matthew Scotch

Publikováno v: Viruses, Vol 16, Iss 8, p 1188 (2024)

The SARS-CoV-2 pandemic resulted in a scale-up of viral genomic surveillance globally. However, the wet lab constraints (economic, infrastructural, and personnel) of translating novel virus variant sequence information to meaningful immunological and

Externí odkaz: https://doaj.org/article/8220dd43d53e495094c7bd57428abd45

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Genome Sequence of a Microvirus Recovered from Wastewater in Arizona, USA, in October 2020, Encodes a Previously Undescribed DNA-Binding Protein

Autor: Abriana Smith, Nicole Kaiser, Allan Yanez, Tyler Perleberg, Amir Elyaderani, Peter Skidmore, Sangeet Adhikari, Erin M. Driver, Rolf U. Halden, Arvind Varsani, Matthew Scotch, Temitope O. C. Faleye

Publikováno v: Microbiology Resource Announcements. 11

We describe the genome of Microvirus-AZ-2020, which was identified from wastewater in Arizona, USA, in October 2020. Microvirus-AZ-2020 belongs to subfamily Gokushovirinae and contains six (five known and one hypothetical) open reading frames (ORFs),

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e83074e7d03b8a99cfb6d042423858ac
https://doi.org/10.1128/mra.00337-22

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Impact of sample clarification by size exclusion on virus detection and diversity in wastewater-based epidemiology

Autor: Temitope O.C. Faleye, Peter Skidmore, Amir Elyaderani, Sangeet Adhikari, Nicole Kaiser, Abriana Smith, Allan Yanez, Tyler Perleberg, Erin M. Driver, Rolf U. Halden, Arvind Varsani, Matthew Scotch

Publikováno v: medRxiv

The use of wastewater-based epidemiology (WBE) for early detection of virus circulation and response during the SARS-CoV-2 pandemic increased interest in and use of virus concentration protocols that are quick, scalable, and efficient. One such proto

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1a7ac1fd33891cb6b14ad34a187ae51b
https://doi.org/10.1101/2022.09.25.22280344

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Mass trends of parabens, triclocarban and triclosan in Arizona wastewater collected after the 2017 FDA ban on antimicrobials and during the COVID-19 pandemic

Autor: Sangeet Adhikari, Rahul Kumar, Erin M. Driver, Tyler D. Perleberg, Allan Yanez, Bridger Johnston, Rolf U. Halden

Publikováno v: Water research. 222

Antimicrobials like parabens, triclosan (TCS), and triclocarban (TCC) are of public health concern worldwide due to their endocrine-disrupting properties and ability to promote antimicrobial drug resistance in human pathogens. The overall use of anti

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::142e77098cd49b3f2752409ad8b32494
https://pubmed.ncbi.nlm.nih.gov/35917669

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