BioNeMo Framework: a modular, high-performance library for AI model development in drug discovery

Autor: John, Peter St., Lin, Dejun, Binder, Polina, Greaves, Malcolm, Shah, Vega, John, John St., Lange, Adrian, Hsu, Patrick, Illango, Rajesh, Ramanathan, Arvind, Anandkumar, Anima, Brookes, David H, Busia, Akosua, Mahajan, Abhishaike, Malina, Stephen, Prasad, Neha, Sinai, Sam, Edwards, Lindsay, Gaudelet, Thomas, Regep, Cristian, Steinegger, Martin, Rost, Burkhard, Brace, Alexander, Hippe, Kyle, Naef, Luca, Kamata, Keisuke, Armstrong, George, Boyd, Kevin, Cao, Zhonglin, Chou, Han-Yi, Chu, Simon, Costa, Allan dos Santos, Darabi, Sajad, Dawson, Eric, Didi, Kieran, Fu, Cong, Geiger, Mario, Gill, Michelle, Hsu, Darren, Kaushik, Gagan, Korshunova, Maria, Kothen-Hill, Steven, Lee, Youhan, Liu, Meng, Livne, Micha, McClure, Zachary, Mitchell, Jonathan, Moradzadeh, Alireza, Mosafi, Ohad, Nashed, Youssef, Paliwal, Saee, Peng, Yuxing, Rabhi, Sara, Ramezanghorbani, Farhad, Reidenbach, Danny, Ricketts, Camir, Roland, Brian, Shah, Kushal, Shimko, Tyler, Sirelkhatim, Hassan, Srinivasan, Savitha, Stern, Abraham C, Toczydlowska, Dorota, Veccham, Srimukh Prasad, Venanzi, Niccolò Alberto Elia, Vorontsov, Anton, Wilber, Jared, Wilkinson, Isabel, Wong, Wei Jing, Xue, Eva, Ye, Cory, Yu, Xin, Zhang, Yang, Zhou, Guoqing, Zandstein, Becca, Dallago, Christian, Trentini, Bruno, Kucukbenli, Emine, Rvachov, Timur, Calleja, Eddie, Israeli, Johnny, Clifford, Harry, Haukioja, Risto, Haemel, Nicholas, Tretina, Kyle, Tadimeti, Neha, Costa, Anthony B

Artificial Intelligence models encoding biology and chemistry are opening new routes to high-throughput and high-quality in-silico drug development. However, their training increasingly relies on computational scale, with recent protein language mode

Externí odkaz: http://arxiv.org/abs/2411.10548

Ophiuchus: Scalable Modeling of Protein Structures through Hierarchical Coarse-graining SO(3)-Equivariant Autoencoders

Autor: Costa, Allan dos Santos, Mitnikov, Ilan, Geiger, Mario, Ponnapati, Manvitha, Smidt, Tess, Jacobson, Joseph

Three-dimensional native states of natural proteins display recurring and hierarchical patterns. Yet, traditional graph-based modeling of protein structures is often limited to operate within a single fine-grained resolution, and lacks hourglass neur

Externí odkaz: http://arxiv.org/abs/2310.02508

A new haemosporidian parasite from the Red-legged Seriema Cariama cristata (Cariamiformes, Cariamidae)

Autor: Ralph Eric Thijl Vanstreels, Carolina Clares dos Anjos, Hassan Jerdy Leandro, Andréa de Moraes Carvalho, Allan Poltronieri Santos, Leandro Egert, Renata Hurtado, Eulogio Carlos Queiróz de Carvalho, Érika Martins Braga, Karin Kirchgatter

Publikováno v: International Journal for Parasitology: Parasites and Wildlife, Vol 18, Iss , Pp 12-19 (2022)

Haemoproteids (Haemosporida, Haemoproteidae) are a diverse group of avian blood parasites that are transmitted by hematophagous dipterans. In this study, we describe Haemoproteus pulcher sp. nov. from a Red-legged Seriema (Cariama cristata) in southe

Externí odkaz: https://doaj.org/article/eb1770eb7518432d88bab90e2fed8deb

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Taxonomic Catalog of the Brazilian Fauna: order Trichoptera (Insecta), diversity and distribution

Autor: Allan P.M. Santos, Leandro L. Dumas, Ana L. Henriques-Oliveira, W. Rafael M. Souza, Lucas M. Camargos, Adolfo R. Calor, Ana M.O. Pes

Publikováno v: Zoologia (Curitiba), Vol 37, Iss , Pp 1-13 (2020)

Caddisflies are a highly diverse group of aquatic insects, particularly in the Neotropical region where there is a high number of endemic taxa. Based on taxonomic contributions published until August 2019, a total of 796 caddisfly species have been r

Externí odkaz: https://doaj.org/article/01b55cabc05b4ff9b5711c634aba2930