Zobrazeno 1 - 10
of 39
pro vyhledávání: '"Allan Kuchinsky"'
Publikováno v:
F1000Research, Vol 3 (2014)
enhancedGraphics (http://apps.cytoscape.org/apps/enhancedGraphics) is a Cytoscape app that implements a series of enhanced charts and graphics that may be added to Cytoscape nodes. It enables users and other app developers to create pie, line, bar, a
Externí odkaz:
https://doaj.org/article/8caee5c21d1346e5a30fa4465434fe7b
Autor:
Nathan Salomonis, Brandon Nelson, Karen Vranizan, Alexander R Pico, Kristina Hanspers, Allan Kuchinsky, Linda Ta, Mark Mercola, Bruce R Conklin
Publikováno v:
PLoS Computational Biology, Vol 5, Iss 11, p e1000553 (2009)
The role of alternative splicing in self-renewal, pluripotency and tissue lineage specification of human embryonic stem cells (hESCs) is largely unknown. To better define these regulatory cues, we modified the H9 hESC line to allow selection of pluri
Externí odkaz:
https://doaj.org/article/3bf906bc61ac4b48b576242007c65c87
Autor:
Hector Plahar, Anil Wipat, Michal Galdzicki, J. Christopher Anderson, Ernst Oberortner, Jeffrey Johnson, Jacqueline Quinn, Cesar Rodriguez, John H. Gennari, Laura Adam, Kevin Clancy, Goksel Misirli, Allan Kuchinsky, Chris J. Myers, Matthew Pocock, Guy-Bart Stan, Bryan Bartley, Drew Endy, Deepak Chandran, Jennifer Hallinan, Matthew W. Lux, Jean Peccoud, Raik Grünberg, Nicholas Roehner, Evren Sirin, Douglas Densmore, Joanna Chen, Mandy L. Wilson, Alan Villalobos, Nathan J. Hillson, Herbert M. Sauro, Jacob Beal
Publikováno v:
Nature Biotechnology. 32:545-550
The synthetic biology research community describes a standard language for exchanging designs of biological 'parts'. The re-use of previously validated designs is critical to the evolution of synthetic biology from a research discipline to an enginee
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7cea93720325ef5f2cab90fa2864bbf0
https://doi.org/10.1038/nbt.2891
https://doi.org/10.1038/nbt.2891
Autor:
John B. Simpson, Thomas Quertermous, Eberhard Grube, Raymond Tabibiazar, Aditya Vailaya, Xuanmin He, Allan Kuchinsky, Euan A. Ashley, Ulrich Gerckens, Stefan Oblin, Jennifer Y. King, Joshua M. Spin, Anya Tsalenko, Rossella Ferrara, Angela Soito, Blake Byers, Andrew J. Connolly
Publikováno v:
Circulation. 114:2644-2654
Background— Recent successes in the treatment of in-stent restenosis (ISR) by drug-eluting stents belie the challenges still faced in certain lesions and patient groups. We analyzed human coronary atheroma in de novo and restenotic disease to ident
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f19b2364a30915a0805e392a0fb56680
https://doi.org/10.1161/circulationaha.106.637025
https://doi.org/10.1161/circulationaha.106.637025
Autor:
Martin B. Leon, Keith M. Channon, Mitsutoshi Oguri, Euan A. Ashley, Xiumei Qu, Mark Orcholski, Allan Kuchinsky, Alain Charest, Stanley L. Hazen, Yoshiji Yamada, Gaurav Chopra, Ziad A. Ali, Stephen Pan, J. Wouter Jukema, Kimihiko Kato, Elizabeth G. Nabel, Yoko Kojima, Kathia Zaleta-Rivera, Nicholas J. Leeper, Wei Qi, Santhi K. Ganesh, Vinicio A. de Jesus Perez, Thomas Quertermous, Christopher M. Adams, Ke Yuan
Publikováno v:
Journal of Clinical Investigation, 124(12), 5159-5174
Angioplasty and stenting is the primary treatment for flow-limiting atherosclerosis; however, this strategy is limited by pathological vascular remodeling. Using a systems approach, we identified a role for the network hub gene glutathione peroxidase
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::31b5a316f26f06050ae4c86b06fc92a2
https://hdl.handle.net/1887/103263
https://hdl.handle.net/1887/103263
Autor:
Robert Kincaid, Aditya Vailaya, Michael Creech, Annette M. Adler, Allan Kuchinsky, Peter Bluvas
Publikováno v:
SAC
Motivations: Technological advances in biomedical research are generating a plethora of heterogeneous data at a high rate. There is a critical need for extraction, integration and management tools for information discovery and synthesis from these he
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bd63e7d10c74ee62f23ca4c2a31c1fba
https://doi.org/10.1093/bioinformatics/bti187
https://doi.org/10.1093/bioinformatics/bti187
Publikováno v:
Morris, JH; Kuchinsky, A; Ferrin, TE; & Pico, AR. (2014). EnhancedGraphics: A Cytoscape app for enhanced node graphics. F1000Research, 3. doi: 10.12688/f1000research.4460.1. UC San Francisco: Retrieved from: http://www.escholarship.org/uc/item/47z7b359
F1000Research, vol 3
F1000Research
F1000Research, vol 3
F1000Research
enhancedGraphics (http://apps.cytoscape.org/apps/enhancedGraphics) is a Cytoscape app that implements a series of enhanced charts and graphics that may be added to Cytoscape nodes. It enables users and other app developers to create pie, line, bar, a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dadcb4be5eaf3e51e516fab6140754dc
http://www.escholarship.org/uc/item/47z7b359
http://www.escholarship.org/uc/item/47z7b359
Publikováno v:
Bioinformatics
Summary: GLay provides Cytoscape users an assorted collection of versatile community structure algorithms and graph layout functions for network clustering and structured visualization. High performance is achieved by dynamically linking highly optim
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::035bbf767abd93ecf0c394e251883fc3
http://europepmc.org/articles/PMC2995124
http://europepmc.org/articles/PMC2995124
Publikováno v:
Computer Networks. 33:1-16
As the number of Web users and the diversity of Web applications continues to explode, Web Quality of Service (QoS) is an increasingly critical issue in the domain of e-commerce. This paper presents experiments designed to estimate users' tolerance o
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::4c185c63554ec320270a08ddcf6909ed
https://doi.org/10.1016/s1389-1286(00)00087-6
https://doi.org/10.1016/s1389-1286(00)00087-6
Publikováno v:
Bioinformatics
Summary: VistaClara is a plug-in for Cytoscape which provides a more flexible means to visualize gene and protein expression within a network context. An extended attribute browser is provided in the form of a graphical and interactive permutation ma
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::af4ee6c044999cbbb72e9f8c5884c2a0
http://europepmc.org/articles/PMC2530886
http://europepmc.org/articles/PMC2530886