Zobrazeno 1 - 9
of 9
pro vyhledávání: '"Ali H. A. Maghrabi"'
Publikováno v:
Methods in Molecular Biology ISBN: 9781071629734
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ec8b0fae01cb943b8b89923369eba175
https://doi.org/10.1007/978-1-0716-2974-1_6
https://doi.org/10.1007/978-1-0716-2974-1_6
Autor:
Björn Wallner, Karolis Uziela, Torsten Schwede, Arne Elofsson, David Menéndez-Hurtado, Česlovas Venclovas, Jie Hou, Myong‐Ho Choe, Gabriel Studer, Kliment Olechnovič, Liam J. McGuffin, Ali H. A. Maghrabi, Kun‐Sop Han, Jianlin Cheng
Publikováno v:
Proteins
Methods to reliably estimate the accuracy of 3D models of proteins are both a fundamental part of most protein folding pipelines and important for reliable identification of the best models when multiple pipelines are used. Here, we describe the prog
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f0e943df4d69be73e72cbfd974e49a60
https://doi.org/10.1002/prot.25767
https://doi.org/10.1002/prot.25767
Autor:
Ali H A, Maghrabi, Liam J, McGuffin
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2165
Assessing the accuracy of 3D models has become a keystone in the protein structure prediction field. ModFOLD7 is our leading resource for Estimates of Model Accuracy (EMA), which has been upgraded by integrating a number of the pioneering pure-single
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::e1b625c0218a4ef271741380b438459e
https://pubmed.ncbi.nlm.nih.gov/32621219
https://pubmed.ncbi.nlm.nih.gov/32621219
Autor:
Ali H. A. Maghrabi, Liam J. McGuffin
Publikováno v:
Methods in Molecular Biology ISBN: 9781071607077
Assessing the accuracy of 3D models has become a keystone in the protein structure prediction field. ModFOLD7 is our leading resource for Estimates of Model Accuracy (EMA), which has been upgraded by integrating a number of the pioneering pure-single
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d45faabce9b40f343573067f383665ac
https://centaur.reading.ac.uk/90370/9/467627_4_En_4_Chapter_Author_removed.pdf
https://centaur.reading.ac.uk/90370/9/467627_4_En_4_Chapter_Author_removed.pdf
Autor:
Neline Kriek, Recep Adiyaman, Sarah K. AlOuda, Sakthivel Vaiyapuri, Gagan D. Flora, Mohammad AboHassan, Chris I. Jones, Amro Elgheznawy, Amanda J. Unsworth, Alexander R. Stainer, Alexander P. Bye, Jonathan M. Gibbins, Ali H. A. Maghrabi, Lisa-Marie Holbrook, Tanya Sage, Liam J. McGuffin, Khaled A. Sahli, Marilena Crescente, Parvathy Sasikumar
Publikováno v:
Blood
Connexins oligomerise to form hexameric hemichannels in the plasma membrane that can further dock together on adjacent cells to form gap junctions and facilitate intercellular trafficking of molecules. In this study, we report the expression and func
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8c70797cc5e328d572812b333558d090
https://pubmed.ncbi.nlm.nih.gov/32822477
https://pubmed.ncbi.nlm.nih.gov/32822477
Autor:
Bajuna R. Salehe, Ali H. A. Maghrabi, Daniel B. Roche, John O. Nealon, Ahmad N. Shuid, Robert Kempster, Liam J. McGuffin, Jennifer D. Atkins
Publikováno v:
Proteins: Structure, Function, and Genetics
Proteins: Structure, Function, and Genetics, 2018, 86, pp.335-344. ⟨10.1002/prot.25360⟩
Proteins: Structure, Function, and Genetics, Wiley, 2018, 86, pp.335-344. ⟨10.1002/prot.25360⟩
Proteins: Structure, Function, and Genetics, 2018, 86, pp.335-344. ⟨10.1002/prot.25360⟩
Proteins: Structure, Function, and Genetics, Wiley, 2018, 86, pp.335-344. ⟨10.1002/prot.25360⟩
International audience; Our aim in CASP12 was to improve our Template‐Based Modeling (TBM) methods through better model selection, accuracy self‐estimate (ASE) scores and refinement. To meet this aim, we developed two new automated methods, which
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::010b1124c092328803fe484a0b04c4c6
https://doi.org/10.1002/prot.25360
https://doi.org/10.1002/prot.25360
Autor:
Ali H. A. Maghrabi, Liam J. McGuffin
Publikováno v:
Nucleic Acids Research
Methods that reliably estimate the likely similarity between the predicted and native structures of proteins have become essential for driving the acceptance and adoption of three-dimensional protein models by life scientists. ModFOLD6 is the latest
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d4c8c463c527b41050f779b1b72294e5
https://doi.org/10.1093/nar/gkx332
https://doi.org/10.1093/nar/gkx332
Autor:
John O. Nealon, Recep Adiyaman, Ahmad N. Shuid, Limcy Seby Philomina, Ali H. A. Maghrabi, Danielle A Brackenridge, Liam J. McGuffin
Publikováno v:
Nucleic Acids Research
The IntFOLD server provides a unified resource for the automated prediction of: protein tertiary structures with built-in estimates of model accuracy (EMA), protein structural domain boundaries, natively unstructured or disordered regions in proteins
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c87ba9bbfff4693631f838694ac93c0e
https://centaur.reading.ac.uk/83525/1/PUBLISHED_VERSION_gkz322.pdf
https://centaur.reading.ac.uk/83525/1/PUBLISHED_VERSION_gkz322.pdf
Autor:
Arne Elofsson, David Menéndez Hurtado, Chen Keasar, Ali H. A. Maghrabi, Balachandran Manavalan, Jooyoung Lee, Björn Wallner, Keehyoung Joo, Liam J. McGuffin, Tomer Sidi, Robert Pilstål, Karolis Uziela, Claudio Mirabello
Publikováno v:
Proteins. 86
Methods to reliably estimate the quality of 3D models of proteins are essential drivers for the wide adoption and serious acceptance of protein structure predictions by life scientists. In this article, the most successful groups in CASP12 describe t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::98478b0c4c4ea76a4253e91120fbbf24
https://pubmed.ncbi.nlm.nih.gov/28975666
https://pubmed.ncbi.nlm.nih.gov/28975666