Zobrazeno 1 - 10
of 38
pro vyhledávání: '"Alexandra E Gylfe"'
Autor:
Johanna Kondelin, Kari Salokas, Lilli Saarinen, Kristian Ovaska, Heli Rauanheimo, Roosa‐Maria Plaketti, Jiri Hamberg, Xiaonan Liu, Leena Yadav, Alexandra E Gylfe, Tatiana Cajuso, Ulrika A Hänninen, Kimmo Palin, Heikki Ristolainen, Riku Katainen, Eevi Kaasinen, Tomas Tanskanen, Mervi Aavikko, Minna Taipale, Jussi Taipale, Laura Renkonen‐Sinisalo, Anna Lepistö, Selja Koskensalo, Jan Böhm, Jukka‐Pekka Mecklin, Halit Ongen, Emmanouil T Dermitzakis, Outi Kilpivaara, Pia Vahteristo, Mikko Turunen, Sampsa Hautaniemi, Sari Tuupanen, Auli Karhu, Niko Välimäki, Markku Varjosalo, Esa Pitkänen, Lauri A Aaltonen
Publikováno v:
EMBO Molecular Medicine, Vol 10, Iss 9, Pp n/a-n/a (2018)
Abstract Microsatellite instability (MSI) leads to accumulation of an excessive number of mutations in the genome, mostly small insertions and deletions. MSI colorectal cancers (CRCs), however, also contain more point mutations than microsatellite‐
Externí odkaz:
https://doaj.org/article/ef342cd752574cf1b549cf1e60ecdf37
Autor:
Alexandra E Gylfe, Riku Katainen, Johanna Kondelin, Tomas Tanskanen, Tatiana Cajuso, Ulrika Hänninen, Jussi Taipale, Minna Taipale, Laura Renkonen-Sinisalo, Heikki Järvinen, Jukka-Pekka Mecklin, Outi Kilpivaara, Esa Pitkänen, Pia Vahteristo, Sari Tuupanen, Auli Karhu, Lauri A Aaltonen
Publikováno v:
PLoS Genetics, Vol 9, Iss 10, p e1003876 (2013)
Hereditary factors are presumed to play a role in one third of colorectal cancer (CRC) cases. However, in the majority of familial CRC cases the genetic basis of predisposition remains unexplained. This is particularly true for families with few affe
Externí odkaz:
https://doaj.org/article/c1257ef9ada64c9eb4b8a442de58bab0
Autor:
Esa Pitkänen, Lauri A. Aaltonen, Sari Tuupanen, Pia Vahteristo, Jukka-Pekka Mecklin, Jan Böhm, Heikki Järvinen, Laura Renkonen-Sinisalo, Jussi Taipale, Minna Taipale, Eevi Kaasinen, Riku Katainen, Heikki Ristolainen, Kimmo Palin, Mervi Aavikko, Jiri Hamberg, Tomas Tanskanen, Sofie Lundgren, Alexandra E. Gylfe, Johanna Kondelin
The median coverage at different genes in the MiSeq data. frequency and significance in exome and MiSeq data (per microsatellite and per gene) as well as the NAFs in the MiSeq data.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::23dede0c9bcab1d627c99725f88f65c1
https://doi.org/10.1158/0008-5472.22414139.v1
https://doi.org/10.1158/0008-5472.22414139.v1
Autor:
Esa Pitkänen, Lauri A. Aaltonen, Sari Tuupanen, Pia Vahteristo, Jukka-Pekka Mecklin, Jan Böhm, Heikki Järvinen, Laura Renkonen-Sinisalo, Jussi Taipale, Minna Taipale, Eevi Kaasinen, Riku Katainen, Heikki Ristolainen, Kimmo Palin, Mervi Aavikko, Jiri Hamberg, Tomas Tanskanen, Sofie Lundgren, Alexandra E. Gylfe, Johanna Kondelin
Primer sequences of the primers utilized in Sanger sequencing.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::88523035a39d0a0713d6edda5872459d
https://doi.org/10.1158/0008-5472.22414145
https://doi.org/10.1158/0008-5472.22414145
Autor:
Esa Pitkänen, Lauri A. Aaltonen, Sari Tuupanen, Pia Vahteristo, Jukka-Pekka Mecklin, Jan Böhm, Heikki Järvinen, Laura Renkonen-Sinisalo, Jussi Taipale, Minna Taipale, Eevi Kaasinen, Riku Katainen, Heikki Ristolainen, Kimmo Palin, Mervi Aavikko, Jiri Hamberg, Tomas Tanskanen, Sofie Lundgren, Alexandra E. Gylfe, Johanna Kondelin
Mutation significance and sequencing information on the MiSeq sequenced microsatellites.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5122186f43a03f0d280c1d6ba1207d56
https://doi.org/10.1158/0008-5472.22414130
https://doi.org/10.1158/0008-5472.22414130
Autor:
Esa Pitkänen, Lauri A. Aaltonen, Sari Tuupanen, Pia Vahteristo, Jukka-Pekka Mecklin, Jan Böhm, Heikki Järvinen, Laura Renkonen-Sinisalo, Jussi Taipale, Minna Taipale, Eevi Kaasinen, Riku Katainen, Heikki Ristolainen, Kimmo Palin, Mervi Aavikko, Jiri Hamberg, Tomas Tanskanen, Sofie Lundgren, Alexandra E. Gylfe, Johanna Kondelin
Clinical and sequencing related information about the 24 exome and 93 MiSeq sequenced tumors.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::972d2fdef2fe714b4c191180818cc98c
https://doi.org/10.1158/0008-5472.22414151
https://doi.org/10.1158/0008-5472.22414151
Autor:
Esa Pitkänen, Lauri A. Aaltonen, Sari Tuupanen, Pia Vahteristo, Jukka-Pekka Mecklin, Jan Böhm, Heikki Järvinen, Laura Renkonen-Sinisalo, Jussi Taipale, Minna Taipale, Eevi Kaasinen, Riku Katainen, Heikki Ristolainen, Kimmo Palin, Mervi Aavikko, Jiri Hamberg, Tomas Tanskanen, Sofie Lundgren, Alexandra E. Gylfe, Johanna Kondelin
Figures describing the following; length distribution of somatic insertions and deletions in the exome sequencing data, coverage of mononucleotide microsatellite sites in both exome and MiSeq sequencing data, mutation frequencies at mononucleotide mi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::143b49d6f8a2f1175cb3380ada06235f
https://doi.org/10.1158/0008-5472.22414154
https://doi.org/10.1158/0008-5472.22414154
Autor:
Esa Pitkänen, Lauri A. Aaltonen, Sari Tuupanen, Pia Vahteristo, Jukka-Pekka Mecklin, Jan Böhm, Heikki Järvinen, Laura Renkonen-Sinisalo, Jussi Taipale, Minna Taipale, Eevi Kaasinen, Riku Katainen, Heikki Ristolainen, Kimmo Palin, Mervi Aavikko, Jiri Hamberg, Tomas Tanskanen, Sofie Lundgren, Alexandra E. Gylfe, Johanna Kondelin
Summary of all the genes included in the MiSeq validation (Sets A and B); mutation frequency and significance in exome and MiSeq data (per microsatellite and per gene) as well as the NAFs in the MiSeq data. repeats. microsatellite classes
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::74da5c05c4ba65a378d99e12089a564a
https://doi.org/10.1158/0008-5472.22414133
https://doi.org/10.1158/0008-5472.22414133
Autor:
Esa Pitkänen, Lauri A. Aaltonen, Sari Tuupanen, Pia Vahteristo, Jukka-Pekka Mecklin, Jan Böhm, Heikki Järvinen, Laura Renkonen-Sinisalo, Jussi Taipale, Minna Taipale, Eevi Kaasinen, Riku Katainen, Heikki Ristolainen, Kimmo Palin, Mervi Aavikko, Jiri Hamberg, Tomas Tanskanen, Sofie Lundgren, Alexandra E. Gylfe, Johanna Kondelin
Frequency of mutations observed at different mononucleotide repeat sites.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::426a8042758ffc88b1eea65de35df4cc
https://doi.org/10.1158/0008-5472.22414142.v1
https://doi.org/10.1158/0008-5472.22414142.v1
Autor:
Esa Pitkänen, Lauri A. Aaltonen, Sari Tuupanen, Pia Vahteristo, Jukka-Pekka Mecklin, Jan Böhm, Heikki Järvinen, Laura Renkonen-Sinisalo, Jussi Taipale, Minna Taipale, Eevi Kaasinen, Riku Katainen, Heikki Ristolainen, Kimmo Palin, Mervi Aavikko, Jiri Hamberg, Tomas Tanskanen, Sofie Lundgren, Alexandra E. Gylfe, Johanna Kondelin
Additional information about the mutations in sets A, B and C.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4cec83c109feff3813bbccbc2080dc15
https://doi.org/10.1158/0008-5472.22414148
https://doi.org/10.1158/0008-5472.22414148