Zobrazeno 1 - 9
of 9
pro vyhledávání: '"Alexander J. Carrillo"'
Clustering analysis of large-scale phenotypic data in the model filamentous fungus Neurospora crassa
Autor:
Alexander J. Carrillo, Ilva E. Cabrera, Marko J. Spasojevic, Patrick Schacht, Jason E. Stajich, Katherine A. Borkovich
Publikováno v:
BMC Genomics, Vol 21, Iss 1, Pp 1-22 (2020)
Abstract Background With 9730 protein-coding genes and a nearly complete gene knockout strain collection, Neurospora crassa is a major model organism for filamentous fungi. Despite this abundance of information, the phenotypes of these gene knockout
Externí odkaz:
https://doaj.org/article/6873fd1ed7b74fe0ad66c5af0dd1f36c
Autor:
Ilva E. Cabrera, Yagna Oza, Alexander J. Carrillo, Logan A. Collier, Sara J. Wright, Liande Li, Katherine A. Borkovich
Publikováno v:
Journal of Fungi, Vol 8, Iss 10, p 1076 (2022)
Heterotrimeric (αβγ) G protein signaling pathways are critical environmental sensing systems found in eukaryotic cells. Exchange of GDP for GTP on the Gα subunit leads to its activation. In contrast, GTP hydrolysis on the Gα is accelerated by Re
Externí odkaz:
https://doaj.org/article/0a6c9b750f0e4ea4a9bd1f6fbbcf3a24
Autor:
Alexander J. Carrillo, Patrick Schacht, Ilva E. Cabrera, Johnathon Blahut, Loren Prudhomme, Sarah Dietrich, Thomas Bekman, Jennifer Mei, Cristian Carrera, Vivian Chen, Isaiah Clark, Gerardo Fierro, Logan Ganzen, Jose Orellana, Shelby Wise, Kevin Yang, Hui Zhong, Katherine A. Borkovich
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 7, Iss 9, Pp 2945-2956 (2017)
Regulation of gene expression by DNA-binding transcription factors is essential for proper control of growth and development in all organisms. In this study, we annotate and characterize growth and developmental phenotypes for transcription factor ge
Externí odkaz:
https://doaj.org/article/a2bd32cbb8ab46568685a52015225ed6
Publikováno v:
Current protocolsLiterature Cited. 2(5)
The filamentous fungus Neurospora crassa has historically been a model for understanding the relationship between genes and metabolism-auxotrophic mutants of N. crassa were used by Beadle and Tatum to develop the one-gene-one-enzyme hypothesis for wh
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5581d68d449c6d290957c62f83fed5ad
https://pubmed.ncbi.nlm.nih.gov/35616476
https://pubmed.ncbi.nlm.nih.gov/35616476
Autor:
Rong Hai, Kenneth Han, Katherine A. Borkovich, Daniel Raygoza, Alexander J. Carrillo, Logan A Collier, Juliet Morrison, Sophia Tsau, Isgouhi Kaloshian, Matthew A. Collin, Walter Bayubay
Here we describe a relatively quick, simple, economical and accurate laboratory developed test (LDT) for detection of SARS-CoV-2 in heated and diluted saliva samples without RNA extraction. Our protocol is a variation of the University of Illinois Ur
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e827b2f00d9dcb3ebf2cc6001d985039
https://doi.org/10.1101/2021.02.21.21251691
https://doi.org/10.1101/2021.02.21.21251691
Clustering analysis of large-scale phenotypic data in the model filamentous fungus Neurospora crassa
Autor:
Ilva E. Cabrera, Katherine A. Borkovich, Patrick Schacht, Alexander J. Carrillo, Marko J. Spasojevic, Jason E. Stajich
Publikováno v:
BMC Genomics
BMC Genomics, Vol 21, Iss 1, Pp 1-22 (2020)
BMC Genomics, Vol 21, Iss 1, Pp 1-22 (2020)
Background With 9730 protein-coding genes and a nearly complete gene knockout strain collection, Neurospora crassa is a major model organism for filamentous fungi. Despite this abundance of information, the phenotypes of these gene knockout mutants h
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::225159721f4c26e938e158984f42ba7e
https://pubmed.ncbi.nlm.nih.gov/33138786
https://pubmed.ncbi.nlm.nih.gov/33138786
Autor:
Shouqiang Ouyang, James D. Kim, Logan A. Collier, Katherine A. Borkovich, Berenise Lopez-Lopez, Arit Ghosh, Alexander J. Carrillo, Amruta V. Garud
Publikováno v:
PLoS ONE, Vol 14, Iss 10, p e0223334 (2019)
PLoS ONE
PloS one, vol 14, iss 10
PLoS ONE
PloS one, vol 14, iss 10
Receptor for Activated C Kinase-1 (RACK1) is a multifunctional eukaryotic scaffolding protein with a seven WD repeat structure. Among their many cellular roles, RACK1 homologs have been shown to serve as alternative Gβ subunits during heterotrimeric
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b6996374ae796c1a584feaad51b2c538
https://doaj.org/article/a03ed311a7ef4c75aabbdfaa03953d4f
https://doaj.org/article/a03ed311a7ef4c75aabbdfaa03953d4f
Autor:
Ilva E. Cabrera, Patrick Schacht, Alexander J. Carrillo, Katherine A. Borkovich, Sarah Dietrich, Hui Zhong, Logan Ganzen, Cristian Carrera, Kevin Yang, Thomas Bekman, Shelby Wise, Isaiah Clark, Loren Prudhomme, Vivian Chen, Johnathon Blahut, Gerardo Fierro, Jennifer Mei, Jose Orellana
Publikováno v:
G3 (Bethesda, Md.), vol 7, iss 9
G3: Genes, Genomes, Genetics, Vol 7, Iss 9, Pp 2945-2956 (2017)
G3: Genes, Genomes, Genetics, Vol 7, Iss 9, Pp 2945-2956 (2017)
Regulation of gene expression by DNA-binding transcription factors is essential for proper control of growth and development in all organisms. In this study, we annotate and characterize growth and developmental phenotypes for transcription factor ge
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::35701172c1a17f4a7801cd1c3041cf26
https://escholarship.org/uc/item/2s84j814
https://escholarship.org/uc/item/2s84j814
Autor:
Amruta Garud, Alexander J Carrillo, Logan A Collier, Arit Ghosh, James D Kim, Berenise Lopez-Lopez, Shouqiang Ouyang, Katherine A Borkovich
Publikováno v:
PLoS ONE, Vol 14, Iss 10, p e0223334 (2019)
Receptor for Activated C Kinase-1 (RACK1) is a multifunctional eukaryotic scaffolding protein with a seven WD repeat structure. Among their many cellular roles, RACK1 homologs have been shown to serve as alternative Gβ subunits during heterotrimeric
Externí odkaz:
https://doaj.org/article/a03ed311a7ef4c75aabbdfaa03953d4f