Marine sediment infauna‐based environmental assessment using metabarcoding identifies potential impact indicator species

Autor: Rachel Hale, Alex Crampton‐Platt, Kat Bruce, Cuong Q. Tang, Michael Maguire, Maija K. Marsh

Publikováno v: Environmental DNA, Vol 6, Iss 3, Pp n/a-n/a (2024)

Abstract Developing large‐scale monitoring strategies for marine habitats with appropriate temporal and spatial resolution is challenging logistically and economically. We compare potential DNA metabarcoding infaunal identification methods with tra

Externí odkaz: https://doaj.org/article/fb85d2279d5640a78e88687229396682

Uncovering Trophic Interactions in Arthropod Predators through DNA Shotgun-Sequencing of Gut Contents.

Autor: Débora P Paula, Benjamin Linard, Alex Crampton-Platt, Amrita Srivathsan, Martijn J T N Timmermans, Edison R Sujii, Carmen S S Pires, Lucas M Souza, David A Andow, Alfried P Vogler

Publikováno v: PLoS ONE, Vol 11, Iss 9, p e0161841 (2016)

Characterizing trophic networks is fundamental to many questions in ecology, but this typically requires painstaking efforts, especially to identify the diet of small generalist predators. Several attempts have been devoted to develop suitable molecu

Externí odkaz: https://doaj.org/article/79627d2c2a9948e28ef0d3a3f22421ec

Metagenomics: A viable tool for reconstructing herbivore diet

Autor: Physilia Ying Shi Chua, Inger Greve Alsos, Kristine Bohmann, Youri Lammers, Sanne Boessenkool, Alex Crampton-Platt

Publikováno v: Molecular Ecology Resources
Chua, P Y S, Crampton-Platt, A, Lammers, Y, Alsos, I G, Boessenkool, S & Bohmann, K 2021, ' Metagenomics : A viable tool for reconstructing herbivore diet ', Molecular Ecology Resources, vol. 21, no. 7, pp. 2249-2263 . https://doi.org/10.1111/1755-0998.13425

Metagenomics can generate data on the diet of herbivores, without the need for primer selection and PCR enrichment steps as is necessary in metabarcoding. Metagenomic approaches to diet analysis have remained relatively unexplored, requiring validati

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3843faea72bcd6d6712fdf167287e90f
https://doi.org/10.1111/1755-0998.13425

A two-step metagenomics approach for prey identification from the blood meals of common vampire bats (Desmodus rotundus)

Autor: Physilia Ying Shi Chua, Christian Carøe, Alex Crampton-Platt, Claudia Sarai Reyes-Avila, Gareth Jones, Daniel G. Streicker, Kristine Bohmann

The feeding behaviour of the sanguivorous common vampire bat (Desmodus rotundus) facilitates the transmission of pathogens that can impact both human and animal health. To formulate effective strategies in controlling the spread of diseases, there is

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::eb7671885680a6f8b0343563438810d6
https://doi.org/10.1101/2021.12.06.470776

Is it Possible that Biological Monitoring can be more Agile? Exploring the use of DNA-Based Monitoring Tools in the Biological Monitoring of a Gas Pipeline Located in the Peruvian Amazon

Autor: Alex Crampton-Platt, Carlos Ahumada Morales, Ruth Celina Zorrilla Salazar, Alan Marlon Garcia Espinoza, Kat Bruce, Monica Santa Maria, Cuong Tang

Publikováno v: SPE International Conference and Exhibition on Health, Safety, Environment, and Sustainability.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::716c480af4e916f7c0170668f50a5c67
https://doi.org/10.2118/199402-ms