Zobrazeno 1 - 10
of 137
pro vyhledávání: '"Aleksey A. Zimin"'
Publikováno v:
PLoS Computational Biology, Vol 19, Iss 3, p e1011032 (2023)
Advances in long-read sequencing technologies have dramatically improved the contiguity and completeness of genome assemblies. Using the latest nanopore-based sequencers, we can generate enough data for the assembly of a human genome from a single fl
Externí odkaz:
https://doaj.org/article/d2794497647f4d98b40e09c441d9e44c
Autor:
Victoria L. Sork, Shawn J. Cokus, Sorel T. Fitz-Gibbon, Aleksey V. Zimin, Daniela Puiu, Jesse A. Garcia, Paul F. Gugger, Claudia L. Henriquez, Ying Zhen, Kirk E. Lohmueller, Matteo Pellegrini, Steven L. Salzberg
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-15 (2022)
The genus Quercus (oaks) has diversified into over 450 species which often play dominant roles in the ecosystems in which they occur. Here the authors present a genome and methylome for a California endemic oak, Quercus lobata, and describe features
Externí odkaz:
https://doaj.org/article/9f631944a7bc4470b05eb062f2f94740
Autor:
Natalia A. Varako, Daria V. Arkhipova, Maria S. Kovyazina, Djamilya G. Yusupova, Aleksander B. Zaytsev, Aleksey A. Zimin, Anastasiia V. Solomina, Pratish Bundhun, Nicha M. Ramchandani, Nataliya A. Suponeva, Mikhail A. Piradov
Publikováno v:
Анналы клинической и экспериментальной неврологии, Vol 16, Iss 1, Pp 53-58 (2022)
Introduction. Timely identification of cognitive impairment is very important, with standardized screening instruments required to assess the cognitive status. However, the arsenal of such screening scales available to clinicians in Russia is limited
Externí odkaz:
https://doaj.org/article/9bcdd3abcf084fa0bd43008dd0b4ceed
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 13, Iss 3 (2023)
AbstractWe used long-read DNA sequencing to assemble the genome of a Southern Han Chinese male. We organized the sequence into chromosomes and filled in gaps using the recently completed T2T-CHM13 genome as a guide, yielding a gap-free genome, Han1,
Externí odkaz:
https://doaj.org/article/be1567c99ba84c8dbc35e5837abac91a
Autor:
Alison D. Scott, Aleksey V. Zimin, Daniela Puiu, Rachael Workman, Monica Britton, Sumaira Zaman, Madison Caballero, Andrew C. Read, Adam J. Bogdanove, Emily Burns, Jill Wegrzyn, Winston Timp, Steven L. Salzberg, David B. Neale
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 10, Iss 11, Pp 3907-3919 (2020)
The giant sequoia (Sequoiadendron giganteum) of California are massive, long-lived trees that grow along the U.S. Sierra Nevada mountains. Genomic data are limited in giant sequoia and producing a reference genome sequence has been an important goal
Externí odkaz:
https://doaj.org/article/860ce952a2d64d18803fdd70720cf46d
Autor:
Alaina Shumate, Aleksey V. Zimin, Rachel M. Sherman, Daniela Puiu, Justin M. Wagner, Nathan D. Olson, Mihaela Pertea, Marc L. Salit, Justin M. Zook, Steven L. Salzberg
Publikováno v:
Genome Biology, Vol 21, Iss 1, Pp 1-18 (2020)
Abstract Background Thousands of experiments and studies use the human reference genome as a resource each year. This single reference genome, GRCh38, is a mosaic created from a small number of individuals, representing a very small sample of the hum
Externí odkaz:
https://doaj.org/article/34b6a666474a481a80ed46ff3264dec4
Autor:
Yuliya A. Shpilyukova, Djamilya G. Yusupova, Diliara R. Akmadullina, Natalia V. Polekhina, Alexander V. Naminov, Mikhail E. Sinelnikov, Aleksander B. Zaytsev, Aleksey A. Zimin, Anastasia V. Belopasova, Ekaterina Yu. Fedotova, Nataliya A. Suponeva, Sergey N. Illarioshkin, Mikhail A. Piradov
Publikováno v:
Анналы клинической и экспериментальной неврологии, Vol 14, Iss 2, Pp 82-87 (2020)
Introduction. Frontotemporal dementia (FTD) is a neurodegenerative disease and is the second most frequent cause of early-onset dementia (before 65 years). Quantitative assessment of disease severity can be an essential tool for predicting and object
Externí odkaz:
https://doaj.org/article/f1b796266fb6430fb6acffb465056a40
Autor:
Natalya A. Suponeva, Dzhamilya G. Yusupova, Kseniya A. Ilyina, Danila A. Melchenko, Anastasiya A. Butkovskaya, Ekaterina S. Zhirova, Anna S. Taratukhina, Aleksey A. Zimin, Aleksandr B. Zaitsev, Anton S. Klochkov, Roman Kh. Lyukmanov, Artem M. Kotov-Smolensky, Anastasia E. Khizhnikova, Guzel A. Gatina, Mansur A. Kutlubaev, Mikhail A. Piradov
Publikováno v:
Анналы клинической и экспериментальной неврологии, Vol 14, Iss 1, Pp 89-96 (2020)
Spasticity after stroke is a factor that causes disability and restricts activities of daily living, and represents a problem for both doctors and patients relatives. At the present time, the modified Ashworth scale (MAS) is a useful method of assess
Externí odkaz:
https://doaj.org/article/56ef239e2ea84576a203947a521f9523
Autor:
Aleksey V Zimin, Steven L Salzberg
Publikováno v:
PLoS Computational Biology, Vol 18, Iss 2, p e1009860 (2022)
Third-generation sequencing technologies can generate very long reads with relatively high error rates. The lengths of the reads, which sometimes exceed one million bases, make them invaluable for resolving complex repeats that cannot be assembled us
Externí odkaz:
https://doaj.org/article/e59d3dc3f38340868488f1b80981ac2d
Autor:
Sam Kovaka, Aleksey V. Zimin, Geo M. Pertea, Roham Razaghi, Steven L. Salzberg, Mihaela Pertea
Publikováno v:
Genome Biology, Vol 20, Iss 1, Pp 1-13 (2019)
Abstract RNA sequencing using the latest single-molecule sequencing instruments produces reads that are thousands of nucleotides long. The ability to assemble these long reads can greatly improve the sensitivity of long-read analyses. Here we present
Externí odkaz:
https://doaj.org/article/a59b453d2b4541c696e1a12aa19c7e0d