Zobrazeno 1 - 10
of 209
pro vyhledávání: '"Alan Archibald"'
Autor:
Bin Yang, Leilei Cui, Miguel Perez-Enciso, Aleksei Traspov, Richard P. M. A. Crooijmans, Natalia Zinovieva, Lawrence B. Schook, Alan Archibald, Kesinee Gatphayak, Christophe Knorr, Alex Triantafyllidis, Panoraia Alexandri, Gono Semiadi, Olivier Hanotte, Deodália Dias, Peter Dovč, Pekka Uimari, Laura Iacolina, Massimo Scandura, Martien A. M. Groenen, Lusheng Huang, Hendrik-Jan Megens
Publikováno v:
Genetics Selection Evolution, Vol 49, Iss 1, Pp 1-15 (2017)
Abstract Background Pigs were domesticated independently in Eastern and Western Eurasia early during the agricultural revolution, and have since been transported and traded across the globe. Here, we present a worldwide survey on 60K genome-wide sing
Externí odkaz:
https://doaj.org/article/7e712df2c6fb45d4b2fd8b474af23494
Autor:
Bin Yang, Leilei Cui, Miguel Perez-Enciso, Aleksei Traspov, Richard P. M. A. Crooijmans, Natalia Zinovieva, Lawrence B. Schook, Alan Archibald, Kesinee Gatphayak, Christophe Knorr, Alex Triantafyllidis, Panoraia Alexandri, Gono Semiadi, Olivier Hanotte, Deodália Dias, Peter Dovč, Pekka Uimari, Laura Iacolina, Massimo Scandura, Martien A. M. Groenen, Lusheng Huang, Hendrik-Jan Megens
Publikováno v:
Genetics Selection Evolution, Vol 52, Iss 1, Pp 1-1 (2020)
An amendment to this paper has been published and can be accessed via the original article.
Externí odkaz:
https://doaj.org/article/a449dbc79c1c4fe180bb22568837a5ca
Autor:
Susan Nicholls, Ricardo Pong-Wong, Louisa Mitchard, Ross Harley, Alan Archibald, Andrew Dick, Michael Bailey
Publikováno v:
PLoS ONE, Vol 11, Iss 3, p e0152155 (2016)
In rodents, immune responses to minor histocompatibility antigens are the most important drivers of corneal graft rejection. However, this has not been confirmed in humans or in a large animal model and the genetic loci are poorly characterised, even
Externí odkaz:
https://doaj.org/article/21b0436feb134eb7ae891a17dcd63dbe
Autor:
Ian Goodhead, Alan Archibald, Peris Amwayi, Andy Brass, John Gibson, Neil Hall, Margaret A Hughes, Moses Limo, Fuad Iraqi, Stephen J Kemp, Harry A Noyes
Publikováno v:
PLoS Neglected Tropical Diseases, Vol 4, Iss 11, p e880 (2010)
African trypanosomes are protozoan parasites that cause "sleeping sickness" in humans and a similar disease in livestock. Trypanosomes also infect laboratory mice and three major quantitative trait loci (QTL) that regulate survival time after infecti
Externí odkaz:
https://doaj.org/article/7ae0bb17c8334b9cbb8ff0ba766c01cf
Autor:
Sébastien Guizard, Katarzyna Miedzinska, Jacqueline Smith, Jonathan Smith, Richard I Kuo, Megan Davey, Alan Archibald, Mick Watson
Publikováno v:
Guizard, S, Miedzinska, K, Smith, J, Smith, J, Kuo, R, Davey, M & Watson, M 2023, ' nf-core/isoseq: Simple gene and isoform annotation with PacBio Iso-Seq long-read sequencing ', Bioinformatics, vol. 39, no. 5, 24323, pp. 1-2 . https://doi.org/10.1093/bioinformatics/btad150
Motivation Iso-Seq RNA long-read sequencing enables the identification of full-length transcripts and isoforms, removing the need for complex analysis such as transcriptome assembly. However, the raw sequencing data need to be processed in a series o
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7b24d1bc51afcc1a2abe19f7d6b7f63a
https://hdl.handle.net/20.500.11820/f3097549-c203-431e-bdd6-2bea6ccf38cc
https://hdl.handle.net/20.500.11820/f3097549-c203-431e-bdd6-2bea6ccf38cc
Characterisation of autophagy disruption in the ileum of pigs infected with Lawsonia intracellularis
Publikováno v:
Salvesen, H A, Sargison, F A, Archibald, A L & Ait-Ali, T 2021, ' Characterisation of autophagy disruption in the ileum of pigs infected with Lawsonia intracellularis ', Veterinary Research Communications . https://doi.org/10.1007/s11259-021-09847-7
Lawsonia intracellularis is the aetiological agent of proliferative enteropathy, an enteric disease endemic in swine. Survival in its intracellular niche of the ileum epithelial lining requires the capacity to subvert, repress or exploit the host imm
Stem cell-derived macrophages as a new platform for studying host-pathogen interactions in livestock
Autor:
Pablo J. Ross, Jayne Hope, Monika Nowak-Imialek, Alan Archibald, Gus R. McFarlane, Heiner Niemann, Christine Tait-Burkard, Linda Sutherland, Sarah Brown, Thomas C Watson, Alistair Lawrence, Pentao Liu, Barry W. McColl, Felicity J. Wynne, Stephen McCleary, Musa A. Hassan, Tom Burdon, Emily Charlton, Finn Grey, Chloe Criag, Anton Gossner, Cosmin Chintoan-Uta, Lucas Lefevre, Xuefei Gao, Stephen Meek, Ryan Taylor, Sarah Fletcher, Tim Regan, Falko Steinbach, Helen Crooke, Laura E.M. Dunn, Barbara Shih, Mark P. Stevens, Lel Eory, Gerard Thomson, Pip Beard
Infectious diseases of farmed and wild animals pose a recurrent threat to food security and human health. The macrophage, a key component of the innate immune system, is the first line of defence against many infectious agents and plays a major role
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e9201f265bd6809a46722e23d9370c94
https://doi.org/10.1101/2021.09.10.459580
https://doi.org/10.1101/2021.09.10.459580
Autor:
Brenda M Murdoch, Kimberly M Davenport, Shangqian Xie, Mazdak Salavati, Emily Clark, Alan Archibald, Stephen N White, Michelle R Mousel, Kim Worley, Suraj Bhattarai, Stephanie D McKay, Alex Caulton, Shannon Clarke, Rudiger Brauning, Tracy Hadfield, Benjamin D Rosen, Timothy P L Smith, Noelle Cockett
Publikováno v:
Journal of Animal Science. 100:185-185
Characterizing the locations of genetic regulatory elements is critical for understanding the regulatory mechanisms of complex phenotypic traits related to production traits and health in livestock species. The Ovine Functional Annotation of Animal G
Autor:
Ross D. Houston, Lel Eory, Shan Wang, Tim P. Bean, Ximing Guo, Alan Archibald, Carolina Peñaloza, Alejandro P. Gutierrez
Publikováno v:
Penaloza, C, Gutierrez Silva, A, Eory, L, Wang, S, Guo, X, Archibald, A, Bean, T & Houston, R 2021, ' A chromosome-level genome assembly for the Pacific oyster Crassostrea gigas ', GigaScience, vol. 10, no. 3 . https://doi.org/10.1093/gigascience/giab020
GigaScience
GigaScience
Background The Pacific oyster (Crassostrea gigas) is a bivalve mollusc with vital roles in coastal ecosystems and aquaculture globally. While extensive genomic tools are available for C. gigas, highly contiguous reference genomes are required to supp
Autor:
Laura Clarke, David J. Richardson, Daniel R. Zerbino, Guy Cochrane, C. J. Schmidt, Peter W. Harrison, Alan Archibald, Jun Fan, Paul Flicek
Publikováno v:
Animal Genetics
Harrison, P W, Fan, J, Richardson, D, Clarke, L, Zerbino, D, Cochrane, G, Archibald, A L, Schmidt, C J & Flicek, P 2018, ' FAANG, establishing metadata standards, validation and best practices for the farmed and companion animal community ', Animal Genetics, vol. 49, no. 6, pp. 520-526 . https://doi.org/10.1111/age.12736
Harrison, P W, Fan, J, Richardson, D, Clarke, L, Zerbino, D, Cochrane, G, Archibald, A L, Schmidt, C J & Flicek, P 2018, ' FAANG, establishing metadata standards, validation and best practices for the farmed and companion animal community ', Animal Genetics, vol. 49, no. 6, pp. 520-526 . https://doi.org/10.1111/age.12736
Summary The Functional Annotation of ANimal Genomes (FAANG) project aims, through a coordinated international effort, to provide high quality functional annotation of animal genomes with an initial focus on farmed and companion animals. A key goal of