Zobrazeno 1 - 10
of 119
pro vyhledávání: '"Alan, Kuo"'
Autor:
Andrei S. Steindorff, Maria Victoria Aguilar-Pontes, Aaron J. Robinson, Bill Andreopoulos, Kurt LaButti, Alan Kuo, Stephen Mondo, Robert Riley, Robert Otillar, Sajeet Haridas, Anna Lipzen, Jane Grimwood, Jeremy Schmutz, Alicia Clum, Ian D. Reid, Marie-Claude Moisan, Gregory Butler, Thi Truc Minh Nguyen, Ken Dewar, Gavin Conant, Elodie Drula, Bernard Henrissat, Colleen Hansel, Steven Singer, Miriam I. Hutchinson, Ronald P. de Vries, Donald O. Natvig, Amy J. Powell, Adrian Tsang, Igor V. Grigoriev
Publikováno v:
Communications Biology, Vol 7, Iss 1, Pp 1-11 (2024)
Abstract Thermophily is a trait scattered across the fungal tree of life, with its highest prevalence within three fungal families (Chaetomiaceae, Thermoascaceae, and Trichocomaceae), as well as some members of the phylum Mucoromycota. We examined 37
Externí odkaz:
https://doaj.org/article/f15cc0944d5348948a7e98a31dffad38
Autor:
Nastasia J. Freyria, Thais C. de Oliveira, Mansi Chovatia, Jennifer Johnson, Alan Kuo, Anna Lipzen, Kerrie W. Barry, Igor V. Grigoriev, Connie Lovejoy
Publikováno v:
Communications Biology, Vol 7, Iss 1, Pp 1-14 (2024)
Abstract Marine microbes that have for eons been adapted to stable salinity regimes are confronted with sudden decreases in salinity in the Arctic Ocean. The episodic freshening is increasing due to climate change with melting multi-year sea-ice and
Externí odkaz:
https://doaj.org/article/04ca908760cf434094ae1b91aaa3c4a0
Autor:
Reid Longley, Aaron Robinson, Julian A. Liber, Abigail E. Bryson, Demosthenes P. Morales, Kurt LaButti, Robert Riley, Stephen J. Mondo, Alan Kuo, Yuko Yoshinaga, Chris Daum, Kerrie Barry, Igor V. Grigoriev, Alessandro Desirò, Patrick S. G. Chain, Gregory Bonito
Publikováno v:
Communications Biology, Vol 6, Iss 1, Pp 1-13 (2023)
Abstract Diverse members of early-diverging Mucoromycota, including mycorrhizal taxa and soil-associated Mortierellaceae, are known to harbor Mollicutes-related endobacteria (MRE). It has been hypothesized that MRE were acquired by a common ancestor
Externí odkaz:
https://doaj.org/article/26b03e3f6152426da85258781f32a199
Autor:
Jose Diesel, Gary Molano, Gabriel J. Montecinos, Kelly DeWeese, Sara Calhoun, Alan Kuo, Anna Lipzen, Asaf Salamov, Igor V. Grigoriev, Daniel C. Reed, Robert J. Miller, Sergey V. Nuzhdin, Filipe Alberto
Publikováno v:
BMC Genomics, Vol 24, Iss 1, Pp 1-13 (2023)
Abstract Macrocystis pyrifera (giant kelp), is a brown macroalga of great ecological importance as a primary producer and structure-forming foundational species that provides habitat for hundreds of species. It has many commercial uses (e.g. source o
Externí odkaz:
https://doaj.org/article/957b18a9522848a29951f51600f67901
Autor:
Sebastian Theobald, Tammi C. Vesth, Elena Geib, Jane L. Nybo, Jens C. Frisvad, Thomas O. Larsen, Alan Kuo, Kurt LaButti, Ellen K. Lyhne, Inge Kjærbølling, Line Ledsgaard, Kerrie Barry, Alicia Clum, Cindy Chen, Matt Nolan, Laura Sandor, Anna Lipzen, Stephen Mondo, Jasmyn Pangilinan, Asaf Salamov, Robert Riley, Ad Wiebenga, Astrid Müller, Roland S. Kun, Ana Carolina dos Santos Gomes, Bernard Henrissat, Jon K. Magnuson, Blake A. Simmons, Miia R. Mäkelä, Uffe H. Mortensen, Igor V. Grigoriev, Matthias Brock, Scott E. Baker, Ronald P. de Vries, Mikael R. Andersen
Publikováno v:
Journal of Fungi, Vol 10, Iss 7, p 507 (2024)
Aspergillus terreus has attracted interest due to its application in industrial biotechnology, particularly for the production of itaconic acid and bioactive secondary metabolites. As related species also seem to possess a prosperous secondary metabo
Externí odkaz:
https://doaj.org/article/965e40567a17419182833c65476fe7d3
Autor:
Nastasia J. Freyria, Alan Kuo, Mansi Chovatia, Jenifer Johnson, Anna Lipzen, Kerrie W. Barry, Igor V. Grigoriev, Connie Lovejoy
Publikováno v:
Communications Biology, Vol 5, Iss 1, Pp 1-13 (2022)
Arctic microalgae show specific adaptation to cold saline arctic conditions with differential expression of several antifreeze proteins, an ice-binding protein and an acyl-esterase involved in cold adaptation.
Externí odkaz:
https://doaj.org/article/5461976f68a94e43ba1cefa145dc65b3
Autor:
Aaron Oliver, Sheila Podell, Agnieszka Pinowska, Jesse C. Traller, Sarah R. Smith, Ryan McClure, Alex Beliaev, Pavlo Bohutskyi, Eric A. Hill, Ariel Rabines, Hong Zheng, Lisa Zeigler Allen, Alan Kuo, Igor V. Grigoriev, Andrew E. Allen, David Hazlebeck, Eric E. Allen
Publikováno v:
Scientific Reports, Vol 11, Iss 1, Pp 1-14 (2021)
Abstract A near-complete diploid nuclear genome and accompanying circular mitochondrial and chloroplast genomes have been assembled from the elite commercial diatom species Nitzschia inconspicua. The 50 Mbp haploid size of the nuclear genome is nearl
Externí odkaz:
https://doaj.org/article/3434cbb5361e48b6b1723b84731549bb
Autor:
Thomas Mock, William Boulton, John-Paul Balmonte, Kevin Barry, Stefan Bertilsson, Jeff Bowman, Moritz Buck, Gunnar Bratbak, Emelia J Chamberlain, Michael Cunliffe, Jessie Creamean, Oliver Ebenhöh, Sarah Lena Eggers, Allison A Fong, Jessie Gardner, Rolf Gradinger, Mats A Granskog, Charlotte Havermans, Thomas Hill, Clara J M Hoppe, Kerstin Korte, Aud Larsen, Oliver Müller, Anja Nicolaus, Ellen Oldenburg, Ovidiu Popa, Swantje Rogge, Hendrik Schäfer, Katyanne Shoemaker, Pauline Snoeijs-Leijonmalm, Anders Torstensson, Klaus Valentin, Anna Vader, Kerrie Barry, I-M A Chen, Alicia Clum, Alex Copeland, Chris Daum, Emiley Eloe-Fadrosh, Brian Foster, Bryce Foster, Igor V Grigoriev, Marcel Huntemann, Natalia Ivanova, Alan Kuo, Nikos C Kyrpides, Supratim Mukherjee, Krishnaveni Palaniappan, T B K Reddy, Asaf Salamov, Simon Roux, Neha Varghese, Tanja Woyke, Dongying Wu, Richard M Leggett, Vincent Moulton, Katja Metfies
Publikováno v:
PLoS Biology, Vol 20, Iss 10, p e3001835 (2022)
Multiomics approaches need to be applied in the central Arctic Ocean to benchmark biodiversity change and to identify novel species and their genes. As part of MOSAiC, EcoOmics will therefore be essential for conservation and sustainable bioprospecti
Externí odkaz:
https://doaj.org/article/6c164b82d62645998848d52205746fe5
Autor:
Shingo Miyauchi, Enikő Kiss, Alan Kuo, Elodie Drula, Annegret Kohler, Marisol Sánchez-García, Emmanuelle Morin, Bill Andreopoulos, Kerrie W. Barry, Gregory Bonito, Marc Buée, Akiko Carver, Cindy Chen, Nicolas Cichocki, Alicia Clum, David Culley, Pedro W. Crous, Laure Fauchery, Mariangela Girlanda, Richard D. Hayes, Zsófia Kéri, Kurt LaButti, Anna Lipzen, Vincent Lombard, Jon Magnuson, François Maillard, Claude Murat, Matt Nolan, Robin A. Ohm, Jasmyn Pangilinan, Maíra de Freitas Pereira, Silvia Perotto, Martina Peter, Stephanie Pfister, Robert Riley, Yaron Sitrit, J. Benjamin Stielow, Gergely Szöllősi, Lucia Žifčáková, Martina Štursová, Joseph W. Spatafora, Leho Tedersoo, Lu-Min Vaario, Akiyoshi Yamada, Mi Yan, Pengfei Wang, Jianping Xu, Tom Bruns, Petr Baldrian, Rytas Vilgalys, Christophe Dunand, Bernard Henrissat, Igor V. Grigoriev, David Hibbett, László G. Nagy, Francis M. Martin
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-17 (2020)
Mycorrhizal symbioses have evolved repeatedly in diverse fungal lineages. A large phylogenomic analysis sheds light on genomic changes associated with transitions from saprotrophy to symbiosis, including divergent genetic innovations underlying the c
Externí odkaz:
https://doaj.org/article/3b590b5be4d447b18b8a203b8982f8ac
Autor:
Javier F. Tabima, Ian A. Trautman, Ying Chang, Yan Wang, Stephen Mondo, Alan Kuo, Asaf Salamov, Igor V. Grigoriev, Jason E. Stajich, Joseph W. Spatafora
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 10, Iss 9, Pp 3417-3433 (2020)
Research into secondary metabolism (SM) production by fungi has resulted in the discovery of diverse, biologically active compounds with significant medicinal applications. The fungi rich in SM production are taxonomically concentrated in the subking
Externí odkaz:
https://doaj.org/article/58741d9460af4e0e8c0ab6e56f7c38fa