Zobrazeno 1 - 10
of 88
pro vyhledávání: '"Akira Kawabe"'
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-15 (2020)
Epigenetic regulation can silence transposons and maintain gene expression. Here the authors survey Arabidopsis mutants defective in epigenetic regulation and show ectopic activation of thousands of cryptic TSSs and altered expression of nearby genes
Externí odkaz:
https://doaj.org/article/5a5fa381abb64ab7be4da437d0706ed1
Autor:
Aoi Hosaka, Raku Saito, Kazuya Takashima, Taku Sasaki, Yu Fu, Akira Kawabe, Tasuku Ito, Atsushi Toyoda, Asao Fujiyama, Yoshiaki Tarutani, Tetsuji Kakutani
Publikováno v:
Nature Communications, Vol 8, Iss 1, Pp 1-10 (2017)
Eukaryotes often silence transposable elements (TEs) via DNA methylation. Here, the authors show that evolution of VANC, an Arabidopsis anti-silencing factor, and its target motifs allows sequence-specific demethylation, suggesting a way TEs can prol
Externí odkaz:
https://doaj.org/article/54261b754c7f4972820be4c89977a724
Publikováno v:
Mitochondrial DNA. Part B. Resources, Vol 3, Iss 2, Pp 488-489 (2018)
The complete chloroplast genome of Sisymbrium irio was determined. The length of the complete chloroplast genome is 154,001 bp. The whole chloroplast genome consists of 83,891 bp long single copy (LSC) and 17,630 bp small single copy (SSC) regions, s
Externí odkaz:
https://doaj.org/article/4310ce0a1a3d467cb80d3a8c1ea4aacd
Publikováno v:
Genes, Vol 9, Iss 12, p 602 (2018)
Plants have a lot of diversity in epigenetic modifications such as DNA methylation in their natural populations or cultivars. Although many studies observing the epigenetic diversity within and among species have been reported, the mechanisms how the
Externí odkaz:
https://doaj.org/article/bd343e98426a469e8c1605046a8e8a64
Publikováno v:
International Journal of Molecular Sciences, Vol 19, Iss 2, p 602 (2018)
Chloroplast capture occurs when the chloroplast of one plant species is introgressed into another plant species. The phylogenies of nuclear and chloroplast markers from East Asian Arabis species are incongruent, which indicates hybrid origin and show
Externí odkaz:
https://doaj.org/article/2f5cf95ca77249c38a80f91905072c9e
Autor:
Takanori Yoshida, Akira Kawabe
Publikováno v:
PLoS ONE, Vol 8, Iss 9, p e73588 (2013)
The pattern of molecular evolution of imprinted genes is controversial and the entire picture is still to be unveiled. Recently, a relationship between the formation of imprinted genes and gene duplication was reported in genome-wide survey of imprin
Externí odkaz:
https://doaj.org/article/a3e8190a347e43cfa8eb0e54f6a7a8b1
Autor:
Jeffrey Ross-Ibarra, Stephen I. Wright, John Paul Foxe, Akira Kawabe, Leah DeRose-Wilson, Gesseca Gos, Deborah Charlesworth, Brandon S. Gaut
Publikováno v:
PLoS ONE, Vol 5, Iss 8 (2010)
Externí odkaz:
https://doaj.org/article/6f43f968420040008a3639b989167676
Autor:
Jeffrey Ross-Ibarra, Stephen I Wright, John Paul Foxe, Akira Kawabe, Leah DeRose-Wilson, Gesseca Gos, Deborah Charlesworth, Brandon S Gaut
Publikováno v:
PLoS ONE, Vol 3, Iss 6, p e2411 (2008)
BackgroundMany of the processes affecting genetic diversity act on local populations. However, studies of plant nucleotide diversity have largely ignored local sampling, making it difficult to infer the demographic history of populations and to asses
Externí odkaz:
https://doaj.org/article/793e0d193f4d4bdfaed92100d5d0a9a2
Autor:
Ryo Fujimoto, Yuki Kinoshita, Akira Kawabe, Tetsu Kinoshita, Kazuya Takashima, Magnus Nordborg, Mikhail E Nasrallah, Kentaro K Shimizu, Hiroshi Kudoh, Tetsuji Kakutani
Publikováno v:
PLoS Genetics, Vol 4, Iss 4, p e1000048 (2008)
A central question in genomic imprinting is how a specific sequence is recognized as the target for epigenetic marking. In both mammals and plants, imprinted genes are often associated with tandem repeats and transposon-related sequences, but the rol
Externí odkaz:
https://doaj.org/article/f904115753fa452f8a7339fece83c2de
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-15 (2020)
Nature Communications
Nature Communications, 11(1)
Nature Communications 11 (2020) 1
Nature Communications
Nature Communications, 11(1)
Nature Communications 11 (2020) 1
In plants, epigenetic regulation is critical for silencing transposons and maintaining proper gene expression. However, its impact on the genome-wide transcription initiation landscape remains elusive. By conducting a genome-wide analysis of transcri