Zobrazeno 1 - 10
of 245
pro vyhledávání: '"Aindrila Mukhopadhyay"'
Autor:
Nawa Raj Baral, Deepanwita Banerjee, Aindrila Mukhopadhyay, Blake A. Simmons, Steven W. Singer, Corinne D. Scown
Publikováno v:
BioResources, Vol 19, Iss 3, Pp 4056-4086 (2024)
Producing scalable, economically viable, low-carbon biofuels or biochemicals hinges on more efficient bioconversion processes. While microbial conversion can offer robust solutions, the native microbial growth process often redirects a large fraction
Externí odkaz:
https://doaj.org/article/06a31dd587ce42df8f689c4051f6ca56
Autor:
Megan E. Garber, Vered Frank, Alexey E. Kazakov, Matthew R. Incha, Alberto A. Nava, Hanqiao Zhang, Luis E. Valencia, Jay D. Keasling, Lara Rajeev, Aindrila Mukhopadhyay
Publikováno v:
mBio, Vol 14, Iss 6 (2023)
ABSTRACTThis report presents multi-genome evidence that REC protein family expansion occurs when the emergence of new pathways gives rise to functional discordance. Specificity between residues in REC domain containing response regulators with paired
Externí odkaz:
https://doaj.org/article/1b5e31e2aab640b78a76252a4e5a2252
Autor:
Rahul Gauttam, Thomas Eng, Zhiying Zhao, Qurrat ul ain Rana, Blake A. Simmons, Yasuo Yoshikuni, Aindrila Mukhopadhyay, Steven W. Singer
Publikováno v:
Microbial Biotechnology, Vol 16, Iss 3, Pp 645-661 (2023)
Abstract Pseudomonas putida has emerged as a promising host for the conversion of biomass‐derived sugars and aromatic intermediates into commercially relevant biofuels and bioproducts. Most of the strain development studies previously published hav
Externí odkaz:
https://doaj.org/article/7d0983234bd548f5b6903c4775bdab7c
Autor:
Thomas Eng, Deepanwita Banerjee, Javier Menasalvas, Yan Chen, Jennifer Gin, Hemant Choudhary, Edward Baidoo, Jian Hua Chen, Axel Ekman, Ramu Kakumanu, Yuzhong Liu Diercks, Alex Codik, Carolyn Larabell, John Gladden, Blake A. Simmons, Jay D. Keasling, Christopher J. Petzold, Aindrila Mukhopadhyay
Publikováno v:
Cell Reports, Vol 42, Iss 9, Pp 113087- (2023)
Summary: Maximizing the production of heterologous biomolecules is a complex problem that can be addressed with a systems-level understanding of cellular metabolism and regulation. Specifically, growth-coupling approaches can increase product titers
Externí odkaz:
https://doaj.org/article/44231f8beb664554bcb8285ca80eab71
Autor:
Runyu Zhao, Annesha Sengupta, Albern X. Tan, Ryan Whelan, Taylor Pinkerton, Javier Menasalvas, Thomas Eng, Aindrila Mukhopadhyay, Young-Shin Jun, Himadri B. Pakrasi, Yinjie J. Tang
Publikováno v:
Scientific Reports, Vol 12, Iss 1, Pp 1-11 (2022)
Abstract Engineered cyanobacterium Synechococcus elongatus can use light and CO2 to produce sucrose, making it a promising candidate for use in co-cultures with heterotrophic workhorses. However, this process is challenged by the mutual stresses gene
Externí odkaz:
https://doaj.org/article/17aee6f0a6d44224899354bb9dd885f4
Autor:
Xi Wang, Edward E. K. Baidoo, Ramu Kakumanu, Silvia Xie, Aindrila Mukhopadhyay, Taek Soon Lee
Publikováno v:
Biotechnology for Biofuels and Bioproducts, Vol 15, Iss 1, Pp 1-14 (2022)
Abstract With the increasing need for microbial bioproduction to replace petrochemicals, it is critical to develop a new industrial microbial workhorse that improves the conversion of lignocellulosic carbon to biofuels and bioproducts in an economica
Externí odkaz:
https://doaj.org/article/5c0e6b152df445cbae5f7d0d023dec11
Autor:
Peter B. Otoupal, Gina M. Geiselman, Asun M. Oka, Carolina A. Barcelos, Hemant Choudhary, Duy Dinh, Wenqing Zhong, HeeJin Hwang, Jay D. Keasling, Aindrila Mukhopadhyay, Eric Sundstrom, Robert W. Haushalter, Ning Sun, Blake A. Simmons, John M. Gladden
Publikováno v:
Microbial Cell Factories, Vol 21, Iss 1, Pp 1-17 (2022)
Abstract Background Rhodosporidium toruloides is capable of co-utilization of complex carbon sources and robust growth from lignocellulosic hydrolysates. This oleaginous yeast is therefore an attractive host for heterologous production of valuable bi
Externí odkaz:
https://doaj.org/article/9d3a8f9fda414c0ba1547d0679e5e91e
Autor:
Hsi-Hsin Lin, Daniel Mendez‐Perez, Jimin Park, Xi Wang, Yan Cheng, Jiajie Huo, Aindrila Mukhopadhyay, Taek Soon Lee, Brent H. Shanks
Publikováno v:
Biotechnology for Biofuels and Bioproducts, Vol 15, Iss 1, Pp 1-18 (2022)
Abstract The strategy of synergistic application of biological and chemical catalysis is an important approach for efficiently converting renewable biomass into chemicals and fuels. In particular, the method of determining the appropriate intermediat
Externí odkaz:
https://doaj.org/article/a305866437c04c32ada65f661bffeb2d
Publikováno v:
Scientific Reports, Vol 12, Iss 1, Pp 1-9 (2022)
Abstract In this report, we systematically characterize 32 response regulators (RRs) from a metal tolerant groundwater isolate, Pseudomonas stutzeri RCH2 to assess the impact of host-derived post-translational phosphorylation. As observed by distinct
Externí odkaz:
https://doaj.org/article/659c940acd25492faf692baef930f30d
Autor:
Kosuke Iwai, Maren Wehrs, Megan Garber, Jess Sustarich, Lauren Washburn, Zachary Costello, Peter W. Kim, David Ando, William R. Gaillard, Nathan J. Hillson, Paul D. Adams, Aindrila Mukhopadhyay, Hector Garcia Martin, Anup K. Singh
Publikováno v:
Microsystems & Nanoengineering, Vol 8, Iss 1, Pp 1-10 (2022)
Abstract We present a droplet-based microfluidic system that enables CRISPR-based gene editing and high-throughput screening on a chip. The microfluidic device contains a 10 × 10 element array, and each element contains sets of electrodes for two el
Externí odkaz:
https://doaj.org/article/ddc89d0ca66e4befb929ada5d4759c71