Zobrazeno 1 - 10
of 19
pro vyhledávání: '"Agnieszka S. Juncker"'
Publikováno v:
PLoS ONE, Vol 4, Iss 10, p e7448 (2009)
Presentation of peptides on Major Histocompatibility Complex (MHC) molecules is the cornerstone in immune system activation and increased knowledge of the characteristics of MHC ligands and their source proteins is highly desirable.In the present lar
Externí odkaz:
https://doaj.org/article/de4a5266e5174b21bf539bf43268aade
Autor:
Henrik Nielsen, Klaus Højgaard Jensen, Agnieszka S. Juncker, Thorarinn Blondal, Flemming Brandt Sørensen, Thomas Skøt Jensen, Rasmus Wernersson, Michael Thorsen, Torben Hansen, Anders Jakobsen, Søren Brunak, Eske Rygaard-Hjalsted, Jose M. G. Izarzugaza, Peter Mouritzen, Pascal Timshel, Rasmus Borup Hansen
Publikováno v:
Jensen, K H, Izarzugaza, J M G, Juncker, A S, Hansen, R B, Hansen, T F, Timshel, P, Blondal, T, Jensen, T S, Rygaard-Hjalsted, E, Mouritzen, P, Thorsen, M, Wernersson, R, Nielsen, H B, Jakobsen, A, Brunak, S & Sørensen, F B 2018, ' Analysis of a gene panel for targeted sequencing of colorectal cancer samples ', OncoTarget, vol. 9, no. 10, pp. 9043-9060 . https://doi.org/10.18632/oncotarget.24138
Oncotarget
Jensen, K H, Izarzugaza, J M G, Sierakowska Juncker, A, Borup Hansen, R, Frøstrup Hansen, T, Timshel, P, Blondal, T, Jensen, T S, Rygaard-Hjalsted, E, Mouritzen, P, Thorsen, M, Wernersson, R, Nielsen, H B, Jakobsen, A, Brunak, S & Brandt Sørensen, F 2018, ' Analysis of a gene panel for targeted sequencing of colorectal cancer samples ', OncoTarget, vol. 9, no. 10, pp. 9043-9060 . https://doi.org/10.18632/oncotarget.24138
Jensen, K H, Izarzugaza, J M G, Juncker, A S, Hansen, R B, Hansen, T F, Timshel, P, Blondal, T, Jensen, T S, Rygaard-Hjalsted, E, Mouritzen, P, Thorsen, M, Wernersson, R, Nielsen, H B, Jakobsen, A, Brunak, S & Sørensen, F B 2018, ' Analysis of a gene panel for targeted sequencing of colorectal cancer samples ', Oncotarget, vol. 9, no. 10, pp. 9043-9060 . https://doi.org/10.18632/oncotarget.24138
Oncotarget
Jensen, K H, Izarzugaza, J M G, Sierakowska Juncker, A, Borup Hansen, R, Frøstrup Hansen, T, Timshel, P, Blondal, T, Jensen, T S, Rygaard-Hjalsted, E, Mouritzen, P, Thorsen, M, Wernersson, R, Nielsen, H B, Jakobsen, A, Brunak, S & Brandt Sørensen, F 2018, ' Analysis of a gene panel for targeted sequencing of colorectal cancer samples ', OncoTarget, vol. 9, no. 10, pp. 9043-9060 . https://doi.org/10.18632/oncotarget.24138
Jensen, K H, Izarzugaza, J M G, Juncker, A S, Hansen, R B, Hansen, T F, Timshel, P, Blondal, T, Jensen, T S, Rygaard-Hjalsted, E, Mouritzen, P, Thorsen, M, Wernersson, R, Nielsen, H B, Jakobsen, A, Brunak, S & Sørensen, F B 2018, ' Analysis of a gene panel for targeted sequencing of colorectal cancer samples ', Oncotarget, vol. 9, no. 10, pp. 9043-9060 . https://doi.org/10.18632/oncotarget.24138
Colorectal cancer (CRC) is a leading cause of death worldwide. Surgical intervention is a successful treatment for stage I patients, whereas other more advanced cases may require adjuvant chemotherapy. The selection of effective adjuvant treatments r
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1186f14788fb1a380f4f951fbeaf6770
https://curis.ku.dk/portal/da/publications/analysis-of-a-gene-panel-for-targeted-sequencing-of-colorectal-cancer-samples(d80ec566-6a09-4680-a670-36cf8003706f).html
https://curis.ku.dk/portal/da/publications/analysis-of-a-gene-panel-for-targeted-sequencing-of-colorectal-cancer-samples(d80ec566-6a09-4680-a670-36cf8003706f).html
Autor:
Björn M. Hallström, Kanchana Rueksomtawin Kildegaard, Thomas Blicher, Svetlana Sherstyk, Irina Borodina, Jerome Maury, Niels Bjerg Jensen, Markus J. Herrgård, Scott James Harrison, Agnieszka S. Juncker, Nikolaus Sonnenschein, Jens Nielsen, Jochen Förster
Publikováno v:
Kildegaard, K R, Hallström, B M, Blicher, T H, Sonnenschein, N, Jensen, N B, Sherstyk, S, Harrison, S J, Maury, J, Herrgard, M, Juncker, A, Förster, J, Nielsen, J & Borodina, I 2014, ' Evolution reveals a glutathione-dependent mechanism of 3-hydroxypropionic acid tolerance ', Metabolic Engineering, vol. 26, pp. 57-66 . https://doi.org/10.1016/j.ymben.2014.09.004
Biologically produced 3-hydroxypropionic acid (3HP) is a potential source for sustainable acrylates and can also find direct use as monomer in the production of biodegradable polymers. For industrial scale production there is a need for robust cell f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::498554a0b1d3c7400f751f0cc7ce5b77
https://doi.org/10.1016/j.ymben.2014.09.004
https://doi.org/10.1016/j.ymben.2014.09.004
Autor:
Thomas Ramming, Jonas D. Schmidt, Cecilie L. Søltoft, Agnieszka S. Juncker, Esben S. Sørensen, Henning Gram Hansen, Christian Appenzeller-Herzog, Brian Christensen, Henrik Marcus Geertz-Hansen, Lars Ellgaard
Publikováno v:
The Journal of biological chemistry
Hansen, H G, Schmidt, J D, Søltoft, C L, Ramming, T, Geertz-Hansen, H M, Christensen, B, Sørensen, E S, Juncker, A S, Appenzeller-Herzog, C & Ellgaard, L 2012, ' Hyperactivity of the Ero1α oxidase elicits endoplasmic reticulum stress but no broad antioxidant response ', Journal of Biological Chemistry, vol. 287, no. 47, pp. 39513-39523 . https://doi.org/10.1074/jbc.M112.405050
Hansen, H G, Schmidt, J D, Søltoft, C L, Ramming, T, Geertz-Hansen, H M, Christensen, B, Sørensen, E S, Juncker, A S, Appenzeller-Herzog, C & Ellgaard, L 2012, ' Hyperactivity of the Ero1α oxidase elicits endoplasmic reticulum stress but no broad antioxidant response ', Journal of Biological Chemistry, vol. 287, no. 47, pp. 39513-39523 . https://doi.org/10.1074/jbc.M112.405050
Oxidizing equivalents for the process of oxidative protein folding in the endoplasmic reticulum (ER) of mammalian cells are mainly provided by the Ero1α oxidase. The molecular mechanisms that regulate Ero1α activity in order to harness its oxidativ
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8a1d18c35d0b4c7bfbb24f6bae8d022a
https://doi.org/10.1074/jbc.m112.405050
https://doi.org/10.1074/jbc.m112.405050
Autor:
Kristian Almstrup, Amir Abdollahi, Si Brask Sonne, Christian Schwager, Ludmila Ruban, Peter W. Andrews, Harry Moore, Peter E. Huber, Søren Brunak, Daniel Edsgärd, Niels E. Skakkebæk, Neil J. Harrison, Lise Mette Rahbek Gjerdrum, Marlene D. Dalgaard, Agnieszka S. Juncker, Ewa Rajpert-De Meyts, Henrik Leffers
Publikováno v:
Cancer Research. 69:5241-5250
Testicular germ cell cancers in young adult men derive from a precursor lesion called carcinoma in situ (CIS) of the testis. CIS cells were suggested to arise from primordial germ cells or gonocytes. However, direct studies on purified samples of CIS
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b4a89614ab0812a5d53d4b8891ae345f
https://doi.org/10.1158/0008-5472.can-08-4554
https://doi.org/10.1158/0008-5472.can-08-4554
Publikováno v:
Nature Protocols. 2:2677-2691
Nucleotide abundance measurements using DNA microarray technology are possible only if appropriate probes complementary to the target nucleotides can be identified. Here we present a protocol for selecting DNA probes for microarrays using the OligoWi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::821219e93a38e418f04a10132728305d
https://doi.org/10.1038/nprot.2007.370
https://doi.org/10.1038/nprot.2007.370
Autor:
Jens S. Andersen, Søren Brunak, Lars Kiemer, Matthias Mann, Agnieszka S. Juncker, E. Olof Karlberg, Kasper Lage, Anders M. Hinsby, Anders Fausbøll
Publikováno v:
Hinsby, A M, Kiemer, L, Karlberg, E O, Lage, K, Fausbøll, A, Juncker, A S, Andersen, J S, Mann, M & Brunak, S 2006, ' A wiring of the human nucleolus ', Molecular Cell, vol. 22, pp. 285-295 .
University of Southern Denmark
University of Southern Denmark
Recent proteomic efforts have created an extensive inventory of the human nucleolar proteome. However, approximately 30% of the identified proteins lack functional annotation. We present an approach of assigning function to uncharacterized nucleolar
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7d90b03beb5a7034d67ac2a04a381bb1
https://doi.org/10.1016/j.molcel.2006.03.012
https://doi.org/10.1016/j.molcel.2006.03.012
Publikováno v:
Leukemia. 18:1270-1277
Gene expression profiling is a promising tool for classification of pediatric acute lymphoblastic leukemia (ALL). We analyzed the gene expression at the time of diagnosis for 45 Danish children with ALL. The prediction of 5-year event-free survival o
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::17aee69a25d438496447b3e831c6e479
https://doi.org/10.1038/sj.leu.2403392
https://doi.org/10.1038/sj.leu.2403392
Autor:
Søren Brunak, Thomas Skøt Jensen, Francisco S. Roque, Olivier Taboureau, Konrad Krysiak-Baltyn, Agnieszka S. Juncker, Karine Audouze, Nils Weinhold
Publikováno v:
Audouze, K M L, Juncker, A, Roque, F J S S A, Krysiak-Baltyn, K, Weinhold, N, Taboureau, O, Jensen, T S & Brunak, S 2010, ' Deciphering Diseases and Biological Targets for Environmental Chemicals using Toxicogenomics Networks ', P L o S Computational Biology (Online), vol. 6, no. 5, pp. e1000788 . https://doi.org/10.1371/journal.pcbi.1000788
PLoS Computational Biology
PLoS Computational Biology, Vol 6, Iss 5, p e1000788 (2010)
PLoS Computational Biology
PLoS Computational Biology, Vol 6, Iss 5, p e1000788 (2010)
Exposure to environmental chemicals and drugs may have a negative effect on human health. A better understanding of the molecular mechanism of such compounds is needed to determine the risk. We present a high confidence human protein-protein associat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7ed9ecccce13d28612d515caaf8f31d9
https://orbit.dtu.dk/en/publications/66ee2bad-d4a4-46a3-bbe3-38d4b700d29f
https://orbit.dtu.dk/en/publications/66ee2bad-d4a4-46a3-bbe3-38d4b700d29f
Autor:
Ole Lund, Mette Voldby Larsen, Agnieszka S. Juncker, Søren Brunak, Morten Nielsen, Nils Weinhold
Publikováno v:
PLoS ONE, Vol 4, Iss 10, p e7448 (2009)
PLoS ONE
Juncker, A, Larsen, M V, Weinhold, N, Nielsen, M, Brunak, S & Lund, O 2009, ' Systematic Characterisation of Cellular Localisation and Expression Profiles of Proteins Containing MHC Ligands ', P L o S One, vol. 4, no. 10 . https://doi.org/10.1371/journal.pone.0007448
PLoS ONE
Juncker, A, Larsen, M V, Weinhold, N, Nielsen, M, Brunak, S & Lund, O 2009, ' Systematic Characterisation of Cellular Localisation and Expression Profiles of Proteins Containing MHC Ligands ', P L o S One, vol. 4, no. 10 . https://doi.org/10.1371/journal.pone.0007448
Background Presentation of peptides on Major Histocompatibility Complex (MHC) molecules is the cornerstone in immune system activation and increased knowledge of the characteristics of MHC ligands and their source proteins is highly desirable. Method
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::547f40e015c1703cf51dfc8c979427fd
http://europepmc.org/articles/PMC2758592?pdf=render
http://europepmc.org/articles/PMC2758592?pdf=render