Zobrazeno 1 - 10
of 19
pro vyhledávání: '"Adrian L. Sanborn"'
Autor:
Adrian L Sanborn, Benjamin T Yeh, Jordan T Feigerle, Cynthia V Hao, Raphael JL Townshend, Erez Lieberman Aiden, Ron O Dror, Roger D Kornberg
Publikováno v:
eLife, Vol 10 (2021)
Gene activator proteins comprise distinct DNA-binding and transcriptional activation domains (ADs). Because few ADs have been described, we tested domains tiling all yeast transcription factors for activation in vivo and identified 150 ADs. By mRNA d
Externí odkaz:
https://doaj.org/article/5549d912586745288fbfbf368dffa631
Autor:
Matheus P. Viana, Jianxu Chen, Theo A. Knijnenburg, Ritvik Vasan, Calysta Yan, Joy E. Arakaki, Matte Bailey, Ben Berry, Antoine Borensztejn, Eva M. Brown, Sara Carlson, Julie A. Cass, Basudev Chaudhuri, Kimberly R. Cordes Metzler, Mackenzie E. Coston, Zach J. Crabtree, Steve Davidson, Colette M. DeLizo, Shailja Dhaka, Stephanie Q. Dinh, Thao P. Do, Justin Domingus, Rory M. Donovan-Maiye, Alexandra J. Ferrante, Tyler J. Foster, Christopher L. Frick, Griffin Fujioka, Margaret A. Fuqua, Jamie L. Gehring, Kaytlyn A. Gerbin, Tanya Grancharova, Benjamin W. Gregor, Lisa J. Harrylock, Amanda Haupt, Melissa C. Hendershott, Caroline Hookway, Alan R. Horwitz, H. Christopher Hughes, Eric J. Isaac, Gregory R. Johnson, Brian Kim, Andrew N. Leonard, Winnie W. Leung, Jordan J. Lucas, Susan A. Ludmann, Blair M. Lyons, Haseeb Malik, Ryan McGregor, Gabe E. Medrash, Sean L. Meharry, Kevin Mitcham, Irina A. Mueller, Timothy L. Murphy-Stevens, Aditya Nath, Angelique M. Nelson, Sandra A. Oluoch, Luana Paleologu, T. Alexander Popiel, Megan M. Riel-Mehan, Brock Roberts, Lisa M. Schaefbauer, Magdalena Schwarzl, Jamie Sherman, Sylvain Slaton, M. Filip Sluzewski, Jacqueline E. Smith, Youngmee Sul, Madison J. Swain-Bowden, W. Joyce Tang, Derek J. Thirstrup, Daniel M. Toloudis, Andrew P. Tucker, Veronica Valencia, Winfried Wiegraebe, Thushara Wijeratna, Ruian Yang, Rebecca J. Zaunbrecher, Ramon Lorenzo D. Labitigan, Adrian L. Sanborn, Graham T. Johnson, Ruwanthi N. Gunawardane, Nathalie Gaudreault, Julie A. Theriot, Susanne M. Rafelski
Publikováno v:
Nature. 613:345-354
Understanding how a subset of expressed genes dictates cellular phenotype is a considerable challenge owing to the large numbers of molecules involved, their combinatorics and the plethora of cellular behaviours that they determine1,2. Here we reduce
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a684c7c821c5ce222400005b63258558
https://doi.org/10.1038/s41586-022-05563-7
https://doi.org/10.1038/s41586-022-05563-7
Autor:
Ramon Lorenzo D. Labitigan, Adrian L. Sanborn, Cynthia V. Hao, Caleb K. Chan, Nathan M. Belliveau, Eva M. Brown, Mansi Mehrotra, Julie A. Theriot
The contributions of individual genes to cell-scale morphology and cytoskeletal organization are challenging to define due to the wide intercellular variation of these complex phenotypes. We leveraged the controlled nature of image-based pooled scree
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::9209177a33617bbb1236cae999f4654b
https://doi.org/10.1101/2022.12.27.522042
https://doi.org/10.1101/2022.12.27.522042
Analysis of Hi-C data using SIP effectively identifies loops in organisms from C. elegans to mammals
Autor:
Györgyi Csankovszki, Adrian L. Sanborn, Elizabeth A. Brouhard, Hannah Linsenbaum, Michael H. Nichols, Axel Poulet, Erez Lieberman Aiden, Brianna J. Bixler, Karen Hermetz, Victor G. Corces, M. Jordan Rowley
Publikováno v:
Genome Research. 30:447-458
Chromatin loops are a major component of 3D nuclear organization, visually apparent as intense point-to-point interactions in Hi-C maps. Identification of these loops is a critical part of most Hi-C analyses. However, current methods often miss visua
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::9b165f00e0e556e71145ea1343318596
https://doi.org/10.1101/gr.257832.119
https://doi.org/10.1101/gr.257832.119
Autor:
Raphael J. L. Townshend, Ron O. Dror, Roger D. Kornberg, Adrian L. Sanborn, Cynthia V. Hao, Jordan T. Feigerle, Benjamin T. Yeh, Erez Lieberman Aiden
Publikováno v:
eLife, Vol 10 (2021)
eLife
eLife
Gene activator proteins comprise distinct DNA-binding and transcriptional activation domains (ADs). Because few ADs have been described, we tested domains tiling all yeast transcription factors for activation in vivo and identified 150 ADs. By mRNA d
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f09e18caa18ba3b548e7c537d4000f2e
https://doi.org/10.1096/fasebj.2021.35.s1.03331
https://doi.org/10.1096/fasebj.2021.35.s1.03331
Autor:
Roger D. Kornberg, Raphael J.L. Townshend, Cynthia V. Hao, Adrian L. Sanborn, Benjamin T Yeh, Erez Lieberman Aiden, Jordan T. Feigerle, Ron O. Dror
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f4cb1a71c0662f81ead101839574e0f3
https://doi.org/10.7554/elife.68068.sa2
https://doi.org/10.7554/elife.68068.sa2
Autor:
Stefan Schoenfelder, Brian Glenn St Hilaire, Petra van der Lelij, Jan-Michael Peters, Wen Tang, Gordana Wutz, Karl Mechtler, Iain F. Davidson, Adrian L. Sanborn, Benoit Pignard, Miroslav P Ivanov, Roman R. Stocsits, Peter Fraser, Elisabeth Roitinger, Xingfan Huang, Erez Lieberman Aiden, Kota Nagasaka, Rene Ladurner, Gerhard Dürnberger, Csilla Várnai
Publikováno v:
eLife
eLife, Vol 9 (2020)
eLife, Vol 9 (2020)
Eukaryotic genomes are folded into loops. It is thought that these are formed by cohesin complexes via extrusion, either until loop expansion is arrested by CTCF or until cohesin is removed from DNA by WAPL. Although WAPL limits cohesin’s chromatin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a3c4e248dc34f280439bceca79883c99
Autor:
Adrian L. Sanborn, Elisabeth Roitinger, Gordana Wutz, Miroslav P Ivanov, Rene Ladurner, Petra van der Lelij, Xingfan Huang, Kota Nagasaka, Stefan Schoenfelder, Gerhard Dürnberger, Csilla Várnai, Iain F. Davidson, Roman R. Stocsits, Peter Fraser, Brian Glenn St Hilaire, Benoit Pignard, Karl Mechtler, Erez Lieberman-Aiden, Jan-Michael Peters, Wen Tang
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c6c98df71591813ef0c13098de15676d
https://doi.org/10.7554/elife.52091.sa2
https://doi.org/10.7554/elife.52091.sa2
Autor:
M Jordan, Rowley, Axel, Poulet, Michael H, Nichols, Brianna J, Bixler, Adrian L, Sanborn, Elizabeth A, Brouhard, Karen, Hermetz, Hannah, Linsenbaum, Gyorgyi, Csankovszki, Erez, Lieberman Aiden, Victor G, Corces
Publikováno v:
Genome Res
Chromatin loops are a major component of 3D nuclear organization, visually apparent as intense point-to-point interactions in Hi-C maps. Identification of these loops is a critical part of most Hi-C analyses. However, current methods often miss visua
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::a37683961245706239bb4dcf488df2f9
https://pubmed.ncbi.nlm.nih.gov/32127418
https://pubmed.ncbi.nlm.nih.gov/32127418
Autor:
Ralf C. Kling, Toon Laeremans, Adrian L. Sanborn, Kathryn E. Livingston, William I. Weis, Evan N. Feinberg, Sébastien Granier, Aashish Manglik, Thor S. Thorsen, Brian K. Kobilka, AJ Venkatakrishnan, Ron O. Dror, Weijiao Huang, Jan Steyaert, John R. Traynor, Peter Gmeiner, Hideaki E. Kato, Stephen M. Husbands
Publikováno v:
Nature. 584:E16-E16
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::54241b075c2efb22a67089c338a313ba
https://doi.org/10.1038/s41586-020-2542-z
https://doi.org/10.1038/s41586-020-2542-z