Whole-genome screening for near-diagnostic genetic markers for four western European white oak species identification

Autor: Antoine Kremer, Adline Delcamp, Isabelle Lesur, Stefanie Wagner, Christian Rellstab, Erwan Guichoux, Thibault Leroy

Publikováno v: Annals of Forest Science, Vol 81, Iss 1, Pp 1-24 (2024)

Abstract Key message Mining genome-wide DNA sequences enabled the discovery of near-diagnostic markers for species assignment in four European white oaks (Quercus petraea (Matt.) Liebl., Quercus pubescens Willd., Quercus pyrenaica Willd., and Quercus

Externí odkaz: https://doaj.org/article/03848028db5d4aa8bfa1505cc3fe0ebc

Development of highly validated SNP markers for genetic analyses of chestnut species

Autor: Clément Larue, Erwan Guichoux, Benoît Laurent, Teresa Barreneche, Cécile Robin, Marie Massot, Adline Delcamp, Rémy J. Petit

Publikováno v: Conservation Genetics Resources
Conservation Genetics Resources, Springer, 2021, 13, pp.383-388. ⟨10.1007/s12686-021-01220-9⟩

International audience; To better study and manage chestnut trees and species, we identified nuclear single nucleotide polymorphism (SNP) markers using restriction-associated DNA sequencing. Out of 343 loci tested, 68 SNP markers were selected that w

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ca1aa6ce4803805cf95287a2458b89d0
https://hal.inrae.fr/hal-03273580

A few north Appalachian populations are the source of European black locust

Autor: Coralie Mengal, Kasso Daïnou, Paul D. Bloese, Ludivine Lassois, Cindy Verdu, Emmi Aikio, Marion Pucheu, Annabel J. Porté, Adline Delcamp, Arnaud Monty, Stéphanie Mariette, Olivier De Thier, Xavier Paul Bouteiller, Marcela van Loo, Erwan Guichoux

Publikováno v: Ecology and Evolution
Ecology and Evolution, Wiley Open Access, 2019, 9 (5), pp.2398-2414. ⟨10.1002/ece3.4776⟩

International audience; The role of evolution in biological invasion studies is often overlooked. In order to evaluate the evolutionary mechanisms behind invasiveness, it is crucial to identify the source populations of the introduction. Studies in p

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::15bed07a38bf44e2ffa64f063ad5fcdc
http://hdl.handle.net/20.500.12278/108440

A nuclear DNA barcode for eastern North American oaks and application to a study of hybridization in an Arboretum setting

Autor: Matthew S. Lobdell, Erwan Guichoux, Elisabeth Fitzek, Adline Delcamp, Andrew L. Hipp, Marlene Hahn

Publikováno v: Ecology and Evolution
Ecology and Evolution, Wiley Open Access, 2018, 8 (11), pp.5837-5851. ⟨10.1002/ece3.4122⟩
Ecology and Evolution 11 (8), 5837-5851. (2018)

International audience; DNA barcoding has proved difficult in a number of woody plant genera, including the ecologically important oak genus Quercus. In this study, we utilized restrictionsite-associated DNA sequencing (RAD-seq) to develop an economi

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d08cbbab73f5f88fa03f7b3e1da74224
https://hal.inrae.fr/hal-02621325

Development of nuclear SNP markers for genetic tracking of Iroko, Milicia excelsa and Milicia regia

Autor: Céline Blanc-Jolivet, Adline Delcamp, Olivier J. Hardy, Erwan Guichoux, Kasso Daïnou, Birgit Kersten, Bernd Degen

Publikováno v: Conservation Genetics Resources
Conservation Genetics Resources, Springer, 2017, online fisrt, pp.1-3. ⟨10.1007/s12686-017-0716-2⟩
Conservation Genetics Resources, Springer, 2017, online fisrt (4), pp.1-3. ⟨10.1007/s12686-017-0716-2⟩

Restriction associated DNA sequencing was conducted on two genetically independent individuals of Iroko, Milicia excelsa, for the discovery of nuclear SNPs. Ninety-four samples, well-distributed over the natural range and including timber DNA, were s

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7febfb183574e21d538dec5de8469e06
https://hal.archives-ouvertes.fr/hal-01607190