Zobrazeno 1 - 10
of 10
pro vyhledávání: '"Adele Smart"'
Autor:
Amy F. D. Howard, Istvan N. Huszar, Adele Smart, Michiel Cottaar, Greg Daubney, Taylor Hanayik, Alexandre A. Khrapitchev, Rogier B. Mars, Jeroen Mollink, Connor Scott, Nicola R. Sibson, Jerome Sallet, Saad Jbabdi, Karla L. Miller
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-18 (2023)
Abstract Understanding brain structure and function often requires combining data across different modalities and scales to link microscale cellular structures to macroscale features of whole brain organisation. Here we introduce the BigMac dataset,
Externí odkaz:
https://doaj.org/article/106cfe8ccd9d47aba3d111a96d0102fd
Autor:
Istvan N. Huszar, Menuka Pallebage-Gamarallage, Sarah Bangerter-Christensen, Hannah Brooks, Sean Fitzgibbon, Sean Foxley, Marlies Hiemstra, Amy F.D. Howard, Saad Jbabdi, Daniel Z.L. Kor, Anna Leonte, Jeroen Mollink, Adele Smart, Benjamin C. Tendler, Martin R. Turner, Olaf Ansorge, Karla L. Miller, Mark Jenkinson
Publikováno v:
NeuroImage, Vol 265, Iss , Pp 119792- (2023)
Background: Accurate registration between microscopy and MRI data is necessary for validating imaging biomarkers against neuropathology, and to disentangle complex signal dependencies in microstructural MRI. Existing registration methods often rely o
Externí odkaz:
https://doaj.org/article/267f63747d204042b30e3e21b044b8fb
Autor:
Daniel Z.L. Kor, Saad Jbabdi, Istvan N. Huszar, Jeroen Mollink, Benjamin C. Tendler, Sean Foxley, Chaoyue Wang, Connor Scott, Adele Smart, Olaf Ansorge, Menuka Pallebage-Gamarallage, Karla L. Miller, Amy F.D. Howard
Publikováno v:
NeuroImage, Vol 264, Iss , Pp 119726- (2022)
The acquisition of MRI and histology in the same post-mortem tissue sample enables direct correlation between MRI and histologically-derived parameters. However, there still lacks a standardised automated pipeline to process histology data, with most
Externí odkaz:
https://doaj.org/article/f5ef11d9b2664f16ba61b7dd89eb334b
Autor:
Benjamin C Tendler, Taylor Hanayik, Olaf Ansorge, Sarah Bangerter-Christensen, Gregory S Berns, Mads F Bertelsen, Katherine L Bryant, Sean Foxley, Martijn P van den Heuvel, Amy FD Howard, Istvan N Huszar, Alexandre A Khrapitchev, Anna Leonte, Paul R Manger, Ricarda AL Menke, Jeroen Mollink, Duncan Mortimer, Menuka Pallebage-Gamarallage, Lea Roumazeilles, Jerome Sallet, Lianne H Scholtens, Connor Scott, Adele Smart, Martin R Turner, Chaoyue Wang, Saad Jbabdi, Rogier B Mars, Karla L Miller
Publikováno v:
eLife, Vol 11 (2022)
Post-mortem magnetic resonance imaging (MRI) provides the opportunity to acquire high-resolution datasets to investigate neuroanatomy and validate the origins of image contrast through microscopy comparisons. We introduce the Digital Brain Bank (open
Externí odkaz:
https://doaj.org/article/b98bea2df069462e8087d79c5cbb6996
Autor:
Amy FD Howard, Istvan N Huszar, Adele Smart, Michiel Cottaar, Greg Daubney, Taylor Hanayik, Alexandre A Khrapitchev, Rogier B Mars, Jeroen Mollink, Connor Scott, Nicola R Sibson, Jerome Sallet, Saad Jbabdi, Karla L Miller
Understanding brain structure and function often requires combining data across different modalities and scales to link microscale cellular structures to macroscale features of whole brain organisation. Here we introduce the BigMac dataset, a resourc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::eb6d6a324d0ae776b39c47ad8bbb334f
https://doi.org/10.1101/2022.09.08.506363
https://doi.org/10.1101/2022.09.08.506363
Autor:
Istvan N. Huszar, Menuka Pallebage-Gamarallage, Sarah Bangerter-Christensen, Hannah Brooks, Sean Fitzgibbon, Sean Foxley, Marlies Hiemstra, Amy F.D. Howard, Saad Jbabdi, Daniel Z. L. Kor, Anna Leonte, Jeroen Mollink, Adele Smart, Benjamin C. Tendler, Martin R. Turner, Olaf Ansorge, Karla L. Miller, Mark Jenkinson
BackgroundAccurate registration between microscopy and MRI data is necessary for validating imaging biomarkers against neuropathology, and to disentangle complex signal dependencies in microstructural MRI. Existing registration methods often rely on
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b4ac43043f77577d8e85b9a37392295b
https://doi.org/10.1101/2022.08.11.503605
https://doi.org/10.1101/2022.08.11.503605
Autor:
Istvan N. Huszar, Menuka Pallebage-Gamarallage, Sarah Bangerter-Christensen, Hannah Brooks, Sean Fitzgibbon, Sean Foxley, Marlies Hiemstra, Amy F.D. Howard, Saad Jbabdi, Daniel Z.L. Kor, Anna Leonte, Jeroen Mollink, Adele Smart, Benjamin C. Tendler, Martin R. Turner, Olaf Ansorge, Karla L. Miller, Mark Jenkinson
Publikováno v:
NeuroImage. 265
Accurate registration between microscopy and MRI data is necessary for validating imaging biomarkers against neuropathology, and to disentangle complex signal dependencies in microstructural MRI. Existing registration methods often rely on serial his
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::491192e5810fb1078cf4771b2e265a33
https://pubmed.ncbi.nlm.nih.gov/36509214
https://pubmed.ncbi.nlm.nih.gov/36509214
Autor:
Daniel Z.L. Kor, Saad Jbabdi, Istvan N. Huszar, Jeroen Mollink, Benjamin C. Tendler, Sean Foxley, Chaoyue Wang, Connor Scott, Adele Smart, Olaf Ansorge, Menuka Pallebage-Gamarallage, Karla L. Miller, Amy F.D. Howard
We propose an automated pipeline to extract a quantitative measure for histologicalstaining density (stain area fraction) from immunohistochemical (IHC) stains for voxelwise MRI-histological comparisons. This pipeline addresses IHC artefactsand is ge
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od______2659::a98982df219d666f44f81e808c7bf53f
https://zenodo.org/record/6787620
https://zenodo.org/record/6787620
Autor:
Benjamin C Tendler, Taylor Hanayik, Olaf Ansorge, Sarah Bangerter-Christensen, Gregory S Berns, Mads F Bertelsen, Katherine L Bryant, Sean Foxley, Martijn P van den Heuvel, Amy FD Howard, Istvan N Huszar, Alexandre A Khrapitchev, Anna Leonte, Paul R Manger, Ricarda AL Menke, Jeroen Mollink, Duncan Mortimer, Menuka Pallebage-Gamarallage, Lea Roumazeilles, Jerome Sallet, Lianne H Scholtens, Connor Scott, Adele Smart, Martin R Turner, Chaoyue Wang, Saad Jbabdi, Rogier B Mars, Karla L Miller
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c5b0396a95386e5668915c2ff54dc46b
https://doi.org/10.7554/elife.73153.sa2
https://doi.org/10.7554/elife.73153.sa2
Autor:
Benjamin C Tendler, Taylor Hanayik, Olaf Ansorge, Sarah Bangerter-Christensen, Gregory S Berns, Mads F Bertelsen, Katherine L Bryant, Sean Foxley, Martijn P van den Heuvel, Amy FD Howard, Istvan N Huszar, Alexandre A Khrapitchev, Anna Leonte, Paul R Manger, Ricarda AL Menke, Jeroen Mollink, Duncan Mortimer, Menuka Pallebage-Gamarallage, Lea Roumazeilles, Jerome Sallet, Lianne H Scholtens, Connor Scott, Adele Smart, Martin R Turner, Chaoyue Wang, Saad Jbabdi, Rogier B Mars, Karla L Miller
Publikováno v:
Elife, 11
Post-mortem magnetic resonance imaging (MRI) provides the opportunity to acquire high-resolution datasets to investigate neuroanatomy and validate the origins of image contrast through microscopy comparisons. We introduce the Digital Brain Bank (open
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ef9a3d7e257a9ae871ba372dca96d495
https://pubmed.ncbi.nlm.nih.gov/35297760
https://pubmed.ncbi.nlm.nih.gov/35297760