Integration of text mining and biological network analysis: Identification of essential genes in sulfate-reducing bacteria

Autor: Priya Saxena, Shailabh Rauniyar, Payal Thakur, Ram Nageena Singh, Alain Bomgni, Mathew O. Alaba, Abhilash Kumar Tripathi, Etienne Z. Gnimpieba, Carol Lushbough, Rajesh Kumar Sani

Publikováno v: Frontiers in Microbiology, Vol 14 (2023)

The growth and survival of an organism in a particular environment is highly depends on the certain indispensable genes, termed as essential genes. Sulfate-reducing bacteria (SRB) are obligate anaerobes which thrives on sulfate reduction for its ener

Externí odkaz: https://doaj.org/article/9b169da1060548b69e9aa45814469438

Gene Sets and Mechanisms of Sulfate-Reducing Bacteria Biofilm Formation and Quorum Sensing With Impact on Corrosion

Autor: Abhilash Kumar Tripathi, Payal Thakur, Priya Saxena, Shailabh Rauniyar, Vinoj Gopalakrishnan, Ram Nageena Singh, Venkataramana Gadhamshetty, Etienne Z. Gnimpieba, Bharat K. Jasthi, Rajesh Kumar Sani

Publikováno v: Frontiers in Microbiology, Vol 12 (2021)

Sulfate-reducing bacteria (SRB) have a unique ability to respire under anaerobic conditions using sulfate as a terminal electron acceptor, reducing it to hydrogen sulfide. SRB thrives in many natural environments (freshwater sediments and salty marsh

Externí odkaz: https://doaj.org/article/f24c24c914e74119b4c4170a8322811e

Thermophilic Anaerobic Digestion: Enhanced and Sustainable Methane Production from Co-Digestion of Food and Lignocellulosic Wastes

Autor: Aditi David, Tanvi Govil, Abhilash Kumar Tripathi, Julie McGeary, Kylie Farrar, Rajesh Kumar Sani

Publikováno v: Energies, Vol 11, Iss 8, p 2058 (2018)

This article aims to study the codigestion of food waste (FW) and three different lignocellulosic wastes (LW) (Corn stover (CS), Prairie cordgrass (PCG), and Unbleached paper (UBP)) for thermophilic anaerobic digestion to overcome the limitations of

Externí odkaz: https://doaj.org/article/97dfc352a1634447a91e40456f7c3e26

Contributors

Autor: Mohd Adil, Iqbal Ahmad, Sanjeev Anand, Firoz Ahmad Ansari, Yaser Arafath, Marco Artini, Ana Azevedo, Sivaraj Barath, Samsudeen Malik Basha, Justyna Bauza-Kaszewska, Akshaya Kumar Behera, Chhandashree Behera, Assirbad Behura, Sudipa Bhadra, Prajna Paramita Bhuyan, Níura Madalena Bila, Damon C. Brown, Maria Pia Busnelli, Fábio M. Carvalho, Shruti Chatterjee, Rui Chen, Christudoss Abisha Christy, Caroline Barcelos Costa-Orlandi, Loredana Cristiano, Ana Carolina Moreira da Silva Pires, Maria Alejandra Daniel, Kannan Dheerka Darsha, Mousumi Das, Samanta de Matos Silva, Purbajyoti Deka, Rohan Dhiman, Singh Dikshant, Orlando Donfrancesco, Aifa Fathima, Lauren Foulkes, Ana Marisa Fusco-Almeida, Gashahun Gezahegne, Anindya Sundar Ghosh, Lisa M. Gieg, Luciana C. Gomes, Vinoj Gopalakrishnan, Eugenia Gospodarek-Komkowska, Katarzyna Grudlewska-Buda, Anshu Gupta, Soumya Haldar, Ekramul Haque, Singhal Hardik, Saqib Hassan, Fohad Mabood Husain, Julfequar Hussain, Mrutyunjay Jena, P. Jishma, Karthikeyan Kandaswamy, Ashwin Kannan, Thirupathi Kasthuri, Anubha Kaushik, Vaishali Kaushik, R. Kavi Bharathi, Asad U. Khan, Atif Khan, Javed Ahamad Khan, Rosina Khan, George Segal Kiran, Ashish Kumar, Joanna Kwiecińska-Piróg, Irene C. Lazzarini Behrmann, Swarupa Mallick, Nambiraman Malligarjunan, Amiya Kumar Mandal, Gajanan Mane, Caroline Maria Marcos, Kaila Petronila Medina-Alarcón, Maria José Soares Mendes-Giannini, Filipe J.M. Mergulhão, Abtar Mishra, Amit Mishra, Neha Mishra, Nishu Mittal, Andrea M. Monroy, Hari Prasath Nagaiah, Lincoln Naik, Muruganandam Nandhakumar, Dev Kiran Nayak, Rabindra Nayak, Vidya Devi Negi, Stefania Nottola, Gloria N. Okpala, Lipsa Panda, Shunmugiah Karutha Pandian, Rosanna Papa, Sudhamayee Parida, Salina Patel, Milind S. Patole, Srimanta Patra, Steven L. Percival, Satish T. Pote, Akhilesh A. Potnis, Biswajita Pradhan, Jagannath Pradhan, Jasmin Pradhan, K. Prashanth, R. Prathiviraj, Arumugam Priya, Luciano Procópio, E.K. Radhakrishnan, Prashanth S. Raghavan, Hema Rajaram, Satish Kumar Rajasekharan, Meora Rajeev, Augustus Akshaya Rani, Ankit Rao, Toleti Subba Rao, Sumit Kumar Rastogi, Shailabh Rauniyar, Michela Relucenti, Mohd Sajjad Ahmad Khan, null Samreen, Rajesh Kumar Sani, Ajit Ramesh Sawant, Priya Saxena, Laura Selan, Joseph Selvin, Surajbhan Sevda, Sriram Shankar, Rohit Sharma, Shraddha Sharma, Moshe Shemesh, Bhim Pratap Singh, Dhananjay Singh, Garima Singh, Prashant Kumar Singh, Ram Nageena Singh, Shiv Mohan Singh, Krzysztof Skowron, Jae Jun Song, C.S. Srinandan, T.J. Sushmitha, Marcus Swann, Payal Thakur, Vihang Thite, Vishvanath Tiwari, Abhilash Kumar Tripathi, Raymond J. Turner, Shipra Varshney, Carolina Orlando Vaso, Pratishtha Verma, Diana L. Vullo, Ewa Wałecka-Zacharska, Fergus Watson, Natalia Wiktorczyk-Kapischke, Mukesh Kumar Yadav, Alicja Zimmer, Ruth Zomuansangi, null Zothanpuia

Publikováno v: Understanding Microbial Biofilms ISBN: 9780323999779

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::fa2b6f2b056f69fabfd4e2f5af7d3d3b
https://doi.org/10.1016/b978-0-323-99977-9.09992-0

Integration of text mining and biological network analysis to access essential genes in Desulfovibrio alaskensis G20

Autor: Priya Saxena, Abhilash Kumar Tripathi, Payal Thakur, Shailabh Rauniyar, Vinoj Gopalakrishnan, Ram Nageena Singh, Mathew A. Olakunle, Etienne Z. Gnimpieba, Rajesh Kumar Sani

Publikováno v: 2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::e6a895b76ebcf9602eeb5bc7603b67ab
https://doi.org/10.1109/bibm52615.2021.9669712