Zobrazeno 1 - 10
of 33
pro vyhledávání: '"Abhijeet R. Sonawane"'
Autor:
Marouen Ben Guebila, Tian Wang, Camila M. Lopes-Ramos, Viola Fanfani, Des Weighill, Rebekka Burkholz, Daniel Schlauch, Joseph N. Paulson, Michael Altenbuchinger, Katherine H. Shutta, Abhijeet R. Sonawane, James Lim, Genis Calderer, David G.P. van IJzendoorn, Daniel Morgan, Alessandro Marin, Cho-Yi Chen, Qi Song, Enakshi Saha, Dawn L. DeMeo, Megha Padi, John Platig, Marieke L. Kuijjer, Kimberly Glass, John Quackenbush
Publikováno v:
Genome Biology, Vol 24, Iss 1, Pp 1-23 (2023)
Abstract Inference and analysis of gene regulatory networks (GRNs) require software that integrates multi-omic data from various sources. The Network Zoo (netZoo; netzoo.github.io) is a collection of open-source methods to infer GRNs, conduct differe
Externí odkaz:
https://doaj.org/article/01292b2a2c0c4ab587bb305ea80549fe
Autor:
Francesca Bartoli‐Leonard, Jonas Zimmer, Abhijeet R. Sonawane, Katelyn Perez, Mandy E. Turner, Shiori Kuraoka, Tan Pham, Feifei Li, Masanori Aikawa, Sasha Singh, Luke Brewster, Elena Aikawa
Publikováno v:
Journal of the American Heart Association: Cardiovascular and Cerebrovascular Disease, Vol 12, Iss 6 (2023)
Background Peripheral arterial disease (PAD) is estimated to affect 7% of the adult population in the United States; however, there is currently little understanding of the key cellular and molecular pathways at play. With PAD characterized by vascul
Externí odkaz:
https://doaj.org/article/b348a4532e6d463a9c852bacf1b46798
Autor:
Samantha K. Atkins, Abhijeet R. Sonawane, Romi Brouwhuis, Johana Barrientos, Anna Ha, Maximillian Rogers, Takeshi Tanaka, Takehito Okui, Shiori Kuraoka, Sasha A. Singh, Masanori Aikawa, Elena Aikawa
Publikováno v:
Frontiers in Cardiovascular Medicine, Vol 9 (2022)
Cardiovascular calcification is the lead predictor of cardiovascular events and the top cause of morbidity and mortality worldwide. To date, only invasive surgical options are available to treat cardiovascular calcification despite the growing unders
Externí odkaz:
https://doaj.org/article/b26ad268a87d40c4af998ae76d91abbc
Autor:
Cheng Peng, Evelien R. Van Meel, Andres Cardenas, Sheryl L. Rifas-Shiman, Abhijeet R. Sonawane, Kimberly R. Glass, Diane R. Gold, Thomas A. Platts-Mills, Xihong Lin, Emily Oken, Marie-France Hivert, Andrea A. Baccarelli, Nicolette W. De Jong, Janine F. Felix, Vincent W. Jaddoe, Liesbeth Duijts, Augusto A. Litonjua, Dawn L. DeMeo
Publikováno v:
Epigenetics, Vol 14, Iss 5, Pp 445-466 (2019)
Epigenetic mechanisms integrate both genetic variability and environmental exposures. However, comprehensive epigenome-wide analysis has not been performed across major childhood allergic phenotypes. We examined the association of epigenome-wide DNA
Externí odkaz:
https://doaj.org/article/41aa43c92c09493c8f497cef800d0495
Autor:
Joseph N. Paulson, Cho-Yi Chen, Camila M. Lopes-Ramos, Marieke L. Kuijjer, John Platig, Abhijeet R. Sonawane, Maud Fagny, Kimberly Glass, John Quackenbush
Publikováno v:
BMC Bioinformatics, Vol 18, Iss 1, Pp 1-10 (2017)
Abstract Background Although ultrahigh-throughput RNA-Sequencing has become the dominant technology for genome-wide transcriptional profiling, the vast majority of RNA-Seq studies typically profile only tens of samples, and most analytical pipelines
Externí odkaz:
https://doaj.org/article/39492d2dc8214268be55238a0b71829a
Autor:
Camila M. Lopes-Ramos, Joseph N. Paulson, Cho-Yi Chen, Marieke L. Kuijjer, Maud Fagny, John Platig, Abhijeet R. Sonawane, Dawn L. DeMeo, John Quackenbush, Kimberly Glass
Publikováno v:
BMC Genomics, Vol 18, Iss 1, Pp 1-13 (2017)
Abstract Background Cell lines are an indispensable tool in biomedical research and often used as surrogates for tissues. Although there are recognized important cellular and transcriptomic differences between cell lines and tissues, a systematic ove
Externí odkaz:
https://doaj.org/article/b1ec4aacf4be42a995a86300f3d09b75
Publikováno v:
Frontiers in Genetics, Vol 10 (2019)
Network medicine is an emerging area of research dealing with molecular and genetic interactions, network biomarkers of disease, and therapeutic target discovery. Large-scale biomedical data generation offers a unique opportunity to assess the effect
Externí odkaz:
https://doaj.org/article/7b4c3cd9a0f64d81b6c0ee97e64ec860
Autor:
Farwah Iqbal, Florian Schlotter, Dakota Becker-Greene, Adrien Lupieri, Claudia Goettsch, Joshua D Hutcheson, Maximillian A Rogers, Shinsuke Itoh, Arda Halu, Lang Ho Lee, Mark C Blaser, Andrew K Mlynarchik, Sumihiko Hagita, Shiori Kuraoka, Hao Yu Chen, James C Engert, Livia S A Passos, Prabhash K Jha, Eric A Osborn, Farouc A Jaffer, Simon C Body, Simon C Robson, George Thanassoulis, Masanori Aikawa, Sasha A Singh, Abhijeet R Sonawane, Elena Aikawa
Publikováno v:
European Heart Journal. 44:885-898
AimsCalcific aortic valve disease (CAVD) is the most common valve disease, which consists of a chronic interplay of inflammation, fibrosis, and calcification. In this study, sortilin (SORT1) was identified as a novel key player in the pathophysiology
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::17619affe70613293bf816312001402b
https://doi.org/10.1093/eurheartj/ehac818
https://doi.org/10.1093/eurheartj/ehac818
Autor:
Abhijeet R. Sonawane, Marieke L. Kuijjer, Rebekka Burkholz, Deborah Weighill, John Quackenbush, John Platig, Behrouz Shamsaei, Kimberly Glass, Marouen Ben Guebila, Camila M. Lopes-Ramos
Publikováno v:
Nucleic Acids Research
Gene regulation plays a fundamental role in shaping tissue identity, function, and response to perturbation. Regulatory processes are controlled by complex networks of interacting elements, including transcription factors, miRNAs and their target gen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7a8fa329bac01b03ffb96626c9926481
https://doi.org/10.1093/nar/gkab778
https://doi.org/10.1093/nar/gkab778
Autor:
Bernard Delanghe, Andrew K. Mlynarchik, Yoshihiro Yanagihara, Shin Mukai, Sasha A Singh, Abhijeet R. Sonawane, Masanori Aikawa, Hideyuki Higashi, Michael O. Hottiger, Shiori Kuraoka, Mary C. Whelan, Waqas Nasir
Mass-spectrometry-enabled ADP-ribosylation workflows are developing rapidly, providing researchers a variety of ADP-ribosylome enrichment strategies and mass spectrometric acquisition options. Despite the growth spurt in upstream technologies, system
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ce1a7b8a227786cc9a94e4959d8961b3
https://www.zora.uzh.ch/id/eprint/210700/
https://www.zora.uzh.ch/id/eprint/210700/
