Biogeographical survey of soil microbiomes across sub-Saharan Africa: structure, drivers, and predicted climate-driven changes

Autor: DA Cowan, PH Lebre, CER Amon, RW Becker, HI Boga, A Boulangé, TL Chiyaka, T Coetzee, PC de Jager, O Dikinya, F Eckardt, M Greve, MA Harris, DW Hopkins, HB Houngnandan, P Houngnandan, K Jordaan, E Kaimoyo, AK Kambura, G Kamgan-Nkuekam, TP Makhalanyane, G Maggs-Kölling, E Marais, H Mondlane, E Nghalipo, BW Olivier, M Ortiz, LR Pertierra, J-B Ramond, M Seely, I Sithole-Niang, A Valverde, G Varliero, S Vikram, DH Wall, A Zeze

Publikováno v: Microbiome, Vol 10, Iss 1, Pp 1-22 (2022)

Abstract Background Top-soil microbiomes make a vital contribution to the Earth’s ecology and harbor an extraordinarily high biodiversity. They are also key players in many ecosystem services, particularly in arid regions of the globe such as the A

Externí odkaz: https://doaj.org/article/d479c54724ed4e1480ae424f343b05c0

The soil microbiomes of forest ecosystems in Kenya: their diversity and environmental drivers.

Autor: Onyango LA; Department of Biochemistry, Jomo Kenyatta University of Agriculture and Technology, P. O. Box 62000-00200, Nairobi, Kenya., Ngonga FA; Department of Biochemistry, Jomo Kenyatta University of Agriculture and Technology, P. O. Box 62000-00200, Nairobi, Kenya., Karanja EN; International Centre for Insect Physiology and Ecology, P.O. Box 30772-00100, Nairobi, Kenya., Kuja JO; Department of Botany, Jomo Kenyatta University of Agriculture and Technology, P. O. Box 62000-00200, Nairobi, Kenya., Boga HI; School of Agriculture, Earth and Environmental Sciences, Taita Taveta University, P. O. Box 635-80300, Voi, Kenya., Cowan DA; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., Mwangi KW; International Livestock Research Institute, P.O. Box 30709-00100, Nairobi, Kenya., Maghenda MW; School of Agriculture, Earth and Environmental Sciences, Taita Taveta University, P. O. Box 635-80300, Voi, Kenya., Marinho Lebre PBN; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., Kambura AK; School of Agriculture, Earth and Environmental Sciences, Taita Taveta University, P. O. Box 635-80300, Voi, Kenya. annekambura@ttu.ac.ke.

Publikováno v: Scientific reports [Sci Rep] 2023 May 02; Vol. 13 (1), pp. 7156. Date of Electronic Publication: 2023 May 02.

Biogeographical survey of soil microbiomes across sub-Saharan Africa: structure, drivers, and predicted climate-driven changes.

Autor: Cowan DA; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa. don.cowan@up.ac.za., Lebre PH; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa. pedro.bixiraonetomarinholebre@up.ac.za., Amon C; Institut National Polytechnique Houphouet-Boigny, Cote d'Ivoire, Yamoussoukro, South Africa., Becker RW; Biodiversity Research Centre, Department of Agriculture and Natural Resources Sciences, Namibia University of Science and Technology, Windhoek, Namibia., Boga HI; Taita Taveta University, Voi, Kenya., Boulangé A; Centro de Biotecnologia, Universidade Eduardo Mondlane, Maputo, Mozambique.; UMR InterTryp, CIRAD-IRD, 34398, Montpellier, France., Chiyaka TL; Department of Biotechnology and Biochemistry, University of Zimbabwe, Harare, Zimbabwe., Coetzee T; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., de Jager PC; Department of Plant and Soil Sciences, University of Pretoria, Pretoria, South Africa., Dikinya O; Department of Environmental Science, University of Botswana, Gaborone, Botswana., Eckardt F; Department of Geography, University of Cape Town, Cape Town, South Africa., Greve M; Department of Plant and Soil Sciences, University of Pretoria, Pretoria, South Africa., Harris MA; Department of Plant and Soil Sciences, University of Pretoria, Pretoria, South Africa., Hopkins DW; Scotland's Rural College, Edinburgh, EH9 3JG, UK., Houngnandan HB; Université Nationale d'Agriculture, Porto-Novo, Benin (Laboratoire de Microbiologie Des Sols Et d'Ecologie Microbienne), Porto-Novo, Benin., Houngnandan P; Université Nationale d'Agriculture, Porto-Novo, Benin (Laboratoire de Microbiologie Des Sols Et d'Ecologie Microbienne), Porto-Novo, Benin., Jordaan K; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa.; Departamento de Genética Molecular Y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile., Kaimoyo E; University of Zambia, Lusaka, Zambia., Kambura AK; Taita Taveta University, Voi, Kenya., Kamgan-Nkuekam G; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., Makhalanyane TP; Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., Maggs-Kölling G; Gobabeb-Namib Research Institute, Walvis Bay, Namibia., Marais E; Gobabeb-Namib Research Institute, Walvis Bay, Namibia., Mondlane H; Centro de Biotecnologia, Universidade Eduardo Mondlane, Maputo, Mozambique., Nghalipo E; Biodiversity Research Centre, Department of Agriculture and Natural Resources Sciences, Namibia University of Science and Technology, Windhoek, Namibia., Olivier BW; Department of Plant and Soil Sciences, University of Pretoria, Pretoria, South Africa., Ortiz M; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa.; Department of Biological Sciences, Clemson University, Clemson, SC, USA., Pertierra LR; Department of Plant and Soil Sciences, University of Pretoria, Pretoria, South Africa., Ramond JB; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa.; Departamento de Genética Molecular Y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile., Seely M; Gobabeb-Namib Research Institute, Walvis Bay, Namibia., Sithole-Niang I; Department of Biotechnology and Biochemistry, University of Zimbabwe, Harare, Zimbabwe., Valverde A; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., Varliero G; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., Vikram S; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., Wall DH; Department of Biology, Colorado State University, Fort Collins, USA., Zeze A; Institut National Polytechnique Houphouet-Boigny, Cote d'Ivoire, Yamoussoukro, South Africa.

Publikováno v: Microbiome [Microbiome] 2022 Aug 23; Vol. 10 (1), pp. 131. Date of Electronic Publication: 2022 Aug 23.

Diversity and structure of prokaryotic communities within organic and conventional farming systems in central highlands of Kenya.

Autor: Karanja EN; Department of Biological sciences, University of Embu, Embu, Kenya.; International Centre for Insect Physiology and Ecology, Nairobi, Kenya., Fliessbach A; Research Institute of Organic Agriculture, Frick, Switzerland., Adamtey N; Research Institute of Organic Agriculture, Frick, Switzerland., Kambura AK; Taita Taveta University, School of Agriculture, Earth and Environmental Sciences, Voi, Kenya., Musyoka M; International Centre for Insect Physiology and Ecology, Nairobi, Kenya., Fiaboe K; International Centre for Insect Physiology and Ecology, Nairobi, Kenya.; International Institute of Tropical Agriculture, Cameroon, Yaoundé, Cameroon., Mwirichia R; Department of Biological sciences, University of Embu, Embu, Kenya.

Publikováno v: PloS one [PLoS One] 2020 Aug 13; Vol. 15 (8), pp. e0236574. Date of Electronic Publication: 2020 Aug 13 (Print Publication: 2020).