Zobrazeno 1 - 10
of 16
pro vyhledávání: '"A. K. M. Firoj Mahmud"'
Autor:
Yelin Zhao, Xinxiu Li, Joseph Loscalzo, Martin Smelik, Oleg Sysoev, Yunzhang Wang, A. K. M. Firoj Mahmud, Dina Mansour Aly, Mikael Benson
Publikováno v:
Journal of Translational Medicine, Vol 22, Iss 1, Pp 1-17 (2024)
Abstract Background Characterization of shared cancer mechanisms have been proposed to improve therapy strategies and prognosis. Here, we aimed to identify shared cell–cell interactions (CCIs) within the tumor microenvironment across multiple solid
Externí odkaz:
https://doaj.org/article/767e39a8ea4f431d828c3117e29984c6
Autor:
Kemal Avican, Jehad Aldahdooh, Matteo Togninalli, A. K. M. Firoj Mahmud, Jing Tang, Karsten M. Borgwardt, Mikael Rhen, Maria Fällman
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-14 (2021)
Bacterial stress responses are potential targets for new antimicrobials. Here, Avican et al. present global transcriptomes for 32 bacterial pathogens grown under 11 stress conditions, and identify common and unique regulatory responses, as well as pr
Externí odkaz:
https://doaj.org/article/528c32ad693d42ecb0d3a057d1175df3
Autor:
Abebe Aseffa Negeri, Hassen Mamo, Jyoti M. Gurung, A. K. M. Firoj Mahmud, Maria Fällman, Eyasu Tigabu Seyoum, Adey Feleke Desta, Matthew S. Francis
Publikováno v:
Frontiers in Microbiology, Vol 12 (2021)
The treatment of invasive Escherichia coli infections is a challenge because of the emergence and rapid spread of multidrug resistant strains. Particular problems are those strains that produce extended spectrum β-lactamases (ESBL’s). Although the
Externí odkaz:
https://doaj.org/article/4dea0eaa016f417e86ae344dd3af0581
Autor:
A. K. M. Firoj Mahmud, Kristina Nilsson, Anna Fahlgren, Roberto Navais, Rajdeep Choudhury, Kemal Avican, Maria Fällman
Publikováno v:
mSystems, Vol 5, Iss 6 (2020)
ABSTRACT RpoN, an alternative sigma factor commonly known as σ54, is implicated in persistent stages of Yersinia pseudotuberculosis infections in which genes associated with this regulator are upregulated. We here combined phenotypic and genomic ass
Externí odkaz:
https://doaj.org/article/a3a6c3d7038f4728b7349f8495a1f005
Publikováno v:
Journal of Computational Biology. 27:1313-1328
Multiple transcription factors (TFs) bind to specific sites in the genome and interact among themselves to form the cis-regulatory modules (CRMs). They are essential in modulating the expression of...
Autor:
A. K. M. Firoj Mahmud, Jehad Aldahdooh, Jing Tang, Mikael Rhen, Karsten M. Borgwardt, Kemal Avican, Maria Fällman, Matteo Togninalli
Publikováno v:
Nature Communications, 12 (1)
Nature Communications, Vol 12, Iss 1, Pp 1-14 (2021)
Nature Communications
Nature Communications, Vol 12, Iss 1, Pp 1-14 (2021)
Nature Communications
Bacterial processes necessary for adaption to stressful host environments are potential targets for new antimicrobials. Here, we report large-scale transcriptomic analyses of 32 human bacterial pathogens grown under 11 stress conditions mimicking hum
Autor:
Maria Fällman, Rajdeep Choudhury, Kemal Avican, Anna Fahlgren, Kristina Nilsson, A. K. M. Firoj Mahmud, Roberto Navais
Publikováno v:
mSystems, Vol 5, Iss 6 (2020)
mSystems
mSystems
The alternative sigma factor RpoN (σ54), which is widely distributed in eubacteria, has been implicated in controlling gene expression of importance for numerous functions including virulence. Proper responses to host environments are crucial for ba
SummarySince its introduction, RNA-seq technology has been used extensively in studies of pathogenic bacteria to identify and quantify differences in gene expression across multiple samples from bacteria exposed to different conditions. With some exc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::16029483e51858f1e0b2baa101ba7888
https://doi.org/10.1101/2020.06.09.135822
https://doi.org/10.1101/2020.06.09.135822
Publikováno v:
Journal of computational biology : a journal of computational molecular cell biology. 27(8)
Autor:
Nayyer Taheri, Linda Sandblad, Anna Fahlgren, A. K. M. Firoj Mahmud, Sun Nyunt Wai, Maria Fällman
Publikováno v:
Scientific Reports, Vol 8, Iss 1, Pp 1-14 (2018)
Scientific Reports
Scientific Reports
Campylobacter jejuni is a prevalent human pathogen and a major cause of bacterial gastroenteritis in the world. In humans, C. jejuni colonizes the intestinal tract and its tolerance to bile is crucial for bacteria to survive and establish infection.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9299877db0f918f835a37e7157cfc2ac
http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-153787
http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-153787