The profiling of microbiota in vaginal swab samples using 16S rRNA gene sequencing and IS-pro analysis

Autor: M. Singer, R. Koedooder, M. P. Bos, L. Poort, S. Schoenmakers, P. H. M. Savelkoul, J. S. E. Laven, J. D. de Jonge, S. A. Morré, A. E. Budding

Publikováno v: BMC Microbiology, Vol 21, Iss 1, Pp 1-10 (2021)

Abstract Background 16S rRNA gene sequencing is currently the most common way of determining the composition of microbiota. This technique has enabled many new discoveries to be made regarding the relevance of microbiota to the health and disease of

Externí odkaz: https://doaj.org/article/82b880906eca4e949b5b338cd0763c52

Fecal microbiota composition is a better predictor of recurrent Clostridioides difficile infection than clinical factors in a prospective, multicentre cohort study

Autor: Tessel M. van Rossen, Yvette H. van Beurden, Johannes A. Bogaards, Andries E. Budding, Chris J.J. Mulder, Christina M.J.E. Vandenbroucke-Grauls

Publikováno v: BMC Infectious Diseases, Vol 24, Iss 1, Pp 1-13 (2024)

Abstract Introduction Clostridioides difficile infection (CDI) is the most common cause of antibiotic-associated diarrhoea. Fidaxomicin and fecal microbiota transplantation (FMT) are effective, but expensive therapies to treat recurrent CDI (reCDI).

Externí odkaz: https://doaj.org/article/20cc540d62544c89b53c792927d296f9

The potential of rectal swabs to differentiate simple and complex appendicitis in children with a microbiota-based test

Autor: Sarah-May M. L. The, Tim G. J. de Meij, Andries E. Budding, Roel Bakx, Johanna H. van der Lee, Linda Poort, Huib A. Cense, Hugo A. Heij, L. W. Ernst van Heurn, Ramon R. Gorter

Publikováno v: European Journal of Pediatrics, 181(12), 4221-4226. Springer Verlag
The, S-M M L, de Meij, T G J, Budding, A E, Bakx, R, van der Lee, J H, Poort, L, Cense, H A, Heij, H A, van Heurn, L W E & Gorter, R R 2022, ' The potential of rectal swabs to differentiate simple and complex appendicitis in children with a microbiota-based test ', European Journal of Pediatrics, vol. 181, no. 12, pp. 4221-4226 . https://doi.org/10.1007/s00431-022-04627-0
European journal of pediatrics, 181(12), 4221-4226. Springer Verlag

Currently, accurate biomarkers differentiating simple (phlegmonous) from complex (gangrenous and/or perforated) appendicitis in children are lacking. However, both types may potentially require different treatment strategies, and the search for diagn

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ccf64da5909238af50f236a28e2bcd6a
https://doi.org/10.1007/s00431-022-04627-0

Taxonomic and metabolic diversity of Actinobacteria isolated from faeces of a 28,000-year-old mammoth

Autor: Doris A. van Bergeijk, Hannah E. Augustijn, Somayah S. Elsayed, Joost Willemse, Victor J. Carrión, Mia Urem, Lena V. Grigoreva, Maksim Y. Cheprasov, Semyon Grigoriev, Bas Wintermans, Andries E. Budding, Herman P. Spaink, Marnix H. Medema, Gilles P. van Wezel

Ancient microbial communities of permafrost soils and frozen animal remains represent an archive that has barely been explored. This yet unexplored microbial world is a vast resource that can provide us with new evolutionary insights, metabolic pathw

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::432c94bcb012bd24ecbbf14af8e41485
https://doi.org/10.1101/2022.12.22.521380

Effects of Antibiotics on the Intestinal Microbiota of Mice

Autor: Frederik Boetius Hertz, Andries E. Budding, Malieka van der Lugt-Degen, Paul H. Savelkoul, Anders Løbner-Olesen, Niels Frimodt-Møller

Publikováno v: Antibiotics, Vol 9, Iss 4, p 191 (2020)

Studies on human and mouse gastrointestinal microbiota have correlated the composition of the microbiota to a variety of diseases, as well as proved it vital to prevent colonization with resistant bacteria, a phenomenon known as colonization resistan

Externí odkaz: https://doaj.org/article/c7c2c03db4e446cc86f66218a2aa3d7d