Zobrazeno 1 - 10
of 1 665
pro vyhledávání: '"A Marchet"'
Autor:
Marchet, Camille
This paper provides a comprehensive review of recent advancements in k-mer-based data structures representing collections of several samples (sometimes called colored de Bruijn graphs) and their applications in large-scale sequence indexing and pange
Externí odkaz:
http://arxiv.org/abs/2409.05214
Autor:
Marchet, Camille
This paper provides a comprehensive survey of data structures for representing k-mer sets, which are fundamental in high-throughput sequencing analysis. It categorizes the methods into two main strategies: those using fingerprinting and hashing for c
Externí odkaz:
http://arxiv.org/abs/2409.05210
Autor:
Chloé Bessière, Haoliang Xue, Benoit Guibert, Anthony Boureux, Florence Rufflé, Julien Viot, Rayan Chikhi, Mikaël Salson, Camille Marchet, Thérèse Commes, Daniel Gautheret
Publikováno v:
Genome Biology, Vol 25, Iss 1, Pp 1-16 (2024)
Abstract Indexing techniques relying on k-mers have proven effective in searching for RNA sequences across thousands of RNA-seq libraries, but without enabling direct RNA quantification. We show here that arbitrary RNA sequences can be quantified in
Externí odkaz:
https://doaj.org/article/a609a092c730485c832b8c973417638f
Autor:
Marchet, Camille
This manuscript is a tutorial on tig sequences that emerged after the name "contig", and are of diverse purposes in sequence bioinformatics. We review these different sequences (unitigs, simplitigs, monotigs, omnitigs to cite a few), give intuitions
Externí odkaz:
http://arxiv.org/abs/2209.06318
Autor:
Daniele Sala, Silvia Marchet, Lorenzo Nanetti, Andrea Legati, Caterina Mariotti, Eleonora Lamantea, Daniele Ghezzi, Alessia Catania, Costanza Lamperti
Publikováno v:
Orphanet Journal of Rare Diseases, Vol 19, Iss 1, Pp 1-9 (2024)
Abstract Background MT-ATP6 is a mitochondrial gene which encodes for the intramembrane subunit 6 (or A) of the mitochondrial ATP synthase, also known asl complex V, which is involved in the last step of oxidative phosphorylation to produce cellular
Externí odkaz:
https://doaj.org/article/482c0fe92b70470496f07304e8f01d82
Publikováno v:
In Progress in Solid State Chemistry September 2024 75
Autor:
Chaou, Fatima, Jalafi, Ilyas, Chrir, Anass, Yahakoub, El Hassan, Chourti, Karim, Bendahhou, Amine, El Barkany, Soufian, Marchet, Pascal, Abou-Salama, Mohamed
Publikováno v:
In Ceramics International 1 September 2024 50(17) Part B:31135-31146
Publikováno v:
In Journal of the European Ceramic Society February 2025 45(2)
Publikováno v:
In Journal of the European Ceramic Society June 2024 44(6):3965-3984
Autor:
Sala, Daniele1 (AUTHOR), Marchet, Silvia1 (AUTHOR), Nanetti, Lorenzo1 (AUTHOR), Legati, Andrea1 (AUTHOR), Mariotti, Caterina1 (AUTHOR), Lamantea, Eleonora1 (AUTHOR), Ghezzi, Daniele1,2 (AUTHOR), Catania, Alessia1 (AUTHOR), Lamperti, Costanza1 (AUTHOR) costanza.lamperti@istituto-besta.it
Publikováno v:
Orphanet Journal of Rare Diseases. 5/16/2024, Vol. 19 Issue 1, p1-9. 9p.