Zobrazeno 1 - 10
of 13 522
pro vyhledávání: '"3D genome"'
The 3D Genome in Brain Development: An Exploration of Molecular Mechanisms and Experimental Methods.
Autor:
Rahman, Samir1,2,3,4,5 (AUTHOR) rahman.samir33@gmail.com, Roussos, Panos1,2,3,4,5,6,7 (AUTHOR)
Publikováno v:
Neuroscience Insights. 10/29/2024, p1-15. 15p.
Autor:
Drogaris, Chrisostomos1 (AUTHOR), Zhang, Yanlin1 (AUTHOR), Zhang, Eric1 (AUTHOR), Nazarova, Elena1 (AUTHOR), Sarrazin-Gendron, Roman1 (AUTHOR), Wilhelm-Landry, Sélik1 (AUTHOR), Cyr, Yan2 (AUTHOR), Majewski, Jacek3 (AUTHOR), Blanchette, Mathieu1 (AUTHOR), Waldispühl, Jérôme1 (AUTHOR) jerome.waldispuhl@mcgill.ca
Publikováno v:
BMC Bioinformatics. 8/27/2024, Vol. 25 Issue 1, p1-14. 14p.
Autor:
Feng, Mofan1,2 (AUTHOR), Liu, Liangjie1,2 (AUTHOR), Su, Kai1,2 (AUTHOR), Su, Xianbin3 (AUTHOR), Meng, Luming4 (AUTHOR), Guo, Zehua1,5 (AUTHOR), Cao, Dan6 (AUTHOR), Wang, Jiayi7 (AUTHOR), He, Guang1,2 (AUTHOR) heguang@sjtu.edu.cn, Shi, Yi1,2,8 (AUTHOR) yishi@sjtu.edu.cn
Publikováno v:
BMC Genomics. 9/26/2024, Vol. 25 Issue 1, p1-10. 10p.
Autor:
Mofan Feng, Liangjie Liu, Kai Su, Xianbin Su, Luming Meng, Zehua Guo, Dan Cao, Jiayi Wang, Guang He, Yi Shi
Publikováno v:
BMC Genomics, Vol 25, Iss S2, Pp 1-16 (2024)
Abstract Reliable and ultra-fast DNA and RNA sequencing have been achieved with the emergence of high-throughput sequencing technology. When combining the results of DNA and RNA sequencing for tumor cells of cancer patients, neoantigens that potentia
Externí odkaz:
https://doaj.org/article/043fca89c4d24e0ea85a89a96651c81c
This article considers the problem of 3-dimensional genome reconstruction for single-cell data, and the uniqueness of such reconstructions in the setting of haploid organisms. We consider multiple graph models as representations of this problem, and
Externí odkaz:
http://arxiv.org/abs/2407.10700
Autor:
Chrisostomos Drogaris, Yanlin Zhang, Eric Zhang, Elena Nazarova, Roman Sarrazin-Gendron, Sélik Wilhelm-Landry, Yan Cyr, Jacek Majewski, Mathieu Blanchette, Jérôme Waldispühl
Publikováno v:
BMC Bioinformatics, Vol 25, Iss 1, Pp 1-14 (2024)
Abstract Over the past two decades, scientists have increasingly realized the importance of the three-dimensional (3D) genome organization in regulating cellular activity. Hi-C and related experiments yield 2D contact matrices that can be used to inf
Externí odkaz:
https://doaj.org/article/9883fb4235054b849ee2e9030d8e56ba
Autor:
Pang, Qing You1 (AUTHOR), Chiu, Yi-Chia2 (AUTHOR), Huang, Ruby Yun-Ju2,3,4 (AUTHOR) rubyhuang@ntu.edu.tw
Publikováno v:
Communications Biology. 6/20/2024, Vol. 7 Issue 1, p1-11. 11p.
Three-Dimensional (3D) chromatin interactions, such as enhancer-promoter interactions (EPIs), loops, Topologically Associating Domains (TADs), and A/B compartments play critical roles in a wide range of cellular processes by regulating gene expressio
Externí odkaz:
http://arxiv.org/abs/2403.03231
Autor:
Korchmaros, Annachiara
A motivation for studying the following problems comes from applications to Biology; see \cite{cifuentes20233d}. In the $3$-dimensional Euclidean space ${\bf{E}}^3$, fix six pairwise distinct points \begin{equation*} \label{eqA} \begin{array}{ccc} A=
Externí odkaz:
http://arxiv.org/abs/2403.00407
Autor:
Eva D’haene, Víctor López-Soriano, Pedro Manuel Martínez-García, Soraya Kalayanamontri, Alfredo Dueñas Rey, Ana Sousa-Ortega, Silvia Naranjo, Stijn Van de Sompele, Lies Vantomme, Quinten Mahieu, Sarah Vergult, Ana Neto, José Luis Gómez-Skarmeta, Juan Ramón Martínez-Morales, Miriam Bauwens, Juan Jesús Tena, Elfride De Baere
Publikováno v:
Genome Biology, Vol 25, Iss 1, Pp 1-24 (2024)
Abstract Background Vision depends on the interplay between photoreceptor cells of the neural retina and the underlying retinal pigment epithelium (RPE). Most genes involved in inherited retinal diseases display specific spatiotemporal expression wit
Externí odkaz:
https://doaj.org/article/a3d8d2ce3b6a449b865a48720cdd33d6