Zobrazeno 1 - 7
of 7
pro vyhledávání: '"İlknur, Karadeniz"'
Autor:
İlknur Karadeniz, Arzucan Özgür
Publikováno v:
BMC Bioinformatics, Vol 20, Iss 1, Pp 1-12 (2019)
Abstract Background Although there is an enormous number of textual resources in the biomedical domain, currently, manually curated resources cover only a small part of the existing knowledge. The vast majority of these information is in unstructured
Externí odkaz:
https://doaj.org/article/2e4a5840aac54452bdc473ee45edc449
Autor:
Mehmet Burak, Koca, Esmaeil, Nourani, Ferda, Abbasoğlu, İlknur, Karadeniz, Fatih Erdoğan, Sevilgen
Publikováno v:
Computational Biology and Chemistry. 101:107755
Computational identification of human-virus protein-protein interactions (PHIs) is a worthwhile step towards understanding infection mechanisms. Analysis of the PHI networks is important for the determination of path-ogenic diseases. Prediction of th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b5c9cb55ee3b26a7ed8fec754209a618
https://doi.org/10.1016/j.compbiolchem.2022.107755
https://doi.org/10.1016/j.compbiolchem.2022.107755
Publikováno v:
SIU
Proteins are biological molecules that play a critical role in vital biological processes. Interactions between pathogen proteins and host proteins form pathogen-host interaction (PHI) networks. These bipartite interaction networks have great importa
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::dc1d62b5ee778bcbe84421aec1cb2de0
https://doi.org/10.1109/siu53274.2021.9478041
https://doi.org/10.1109/siu53274.2021.9478041
Publikováno v:
BioNLP-OST@EMNLP-IJNCLP
This paper presents our participation at the Bacteria Biotope Task of the BioNLP Shared Task 2019. Our participation includes two systems for the two subtasks of the Bacteria Biotope Task: the normalization of entities (BB-norm) and the identificatio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f2bc204b260fd167ef3b5457c72a579a
https://hdl.handle.net/11729/5365
https://hdl.handle.net/11729/5365
Publikováno v:
Frontiers in Microbiology, Vol 6 (2015)
Frontiers in Microbiology
Frontiers in Microbiology
Brucella is an intracellular bacterium that causes chronic brucellosis in humans and various mammals. The identification of host-Brucella interaction is crucial to understand host immunity against Brucella infection and Brucella pathogenesis against
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::395f53bcc16de136ffa8752c3b88f226
https://doi.org/10.3389/fmicb.2015.01386
https://doi.org/10.3389/fmicb.2015.01386
Autor:
Kutlu O. Ulgen, Fatih Erdogan Sevilgen, Azat Uğurlu, Saliha Durmuş Tekir, Tunahan Çakır, Gökhan Konuk, Arzucan Özgür, Hasret Sarıyer, İlknur Karadeniz, Ali Semih Sayılırbaş, Mithat Konuk, Emre Ardıç
Publikováno v:
Bioinformatics. 29:1357-1358
Summary: Knowledge of pathogen–host protein interactions is required to better understand infection mechanisms. The pathogen–host interaction search tool (PHISTO) is a web-accessible platform that provides relevant information about pathogen–ho
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4954d30ac970699c9181fccfb8764071
https://doi.org/10.1093/bioinformatics/btt137
https://doi.org/10.1093/bioinformatics/btt137
Autor:
Arzucan Özgür, İlknur Karadeniz
Publikováno v:
BMC Bioinformatics
Background Information regarding bacteria biotopes is important for several research areas including health sciences, microbiology, and food processing and preservation. One of the challenges for scientists in these domains is the huge amount of info
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6d45179eb20a29700a32328419d45f09