Structural variations affecting genes and transposable elements of chromosome 3B in wheats

Autor: François Balfourier, Hélène Rimbert, Romain De Oliveira, Emeric Dynomant, Etienne Paux, Jaroslav Doležel, Jonathan Kitt, Federica Cattonaro, Jan Vrána, Frédéric Choulet

Publikováno v: Frontiers in Genetics
Frontiers in Genetics, Frontiers, 2020, 11, 891/15 p. ⟨10.3389/fgene.2020.00891⟩
Frontiers in Genetics, Vol 11 (2020)

International audience; Structural variations (SVs) such as copy number and presence–absence variations are polymorphisms that are known to impact genome composition at the species level and are associated with phenotypic variations. In the absence

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f974a3cdcab72d7f12cf1dbafec52631
https://hal.inrae.fr/hal-02917729/file/fgene-11-00891.pdf

A Reference Genome Sequence for the European Silver Fir (Abies alba Mill.): A Community-Generated Genomic Resource

Autor: Zeki Kaya, Felix Gugerli, Katalin Csilléry, Jèssica Gómez-Garrido, Katrin Heer, Luca Bianco, Elena Mosca, Birgit Kersten, David B. Neale, Konstantin V. Krutovsky, Christian Rellstab, Mária Höhn, Dušan Gömöry, Lars Opgenoorth, Sabine Brodbeck, Tyler Alioto, Sascha Liepelt, Santiago C. González-Martínez, Fernando Cruz, Giovanni G. Vendramin, Michela Troggio, Matthias Fladung, Berthold Heinze, Barbara Fussi, Christoph Sperisen, Delphine Grivet, Marta Gut, Ole K. Hansen, Kristian K. Ullrich, Bruno Fady, Marjana Westergren, Birgit Ziegenhagen

Publikováno v: G3 (Bethesda, Md.), vol 9, iss 7
Recercat. Dipósit de la Recerca de Catalunya
instname
G3: Genes, Genomes, Genetics, Vol 9, Iss 7, Pp 2039-2049 (2019)
G3
G3, Genetics Society of America, 2019, 9 (7), pp.2039-2049. ⟨10.1534/g3.119.400083⟩
G3-Genes Genomes Genetics 7 (9), 2039-2049. (2019)
G3 (Bethesda Md.) 9 (2019): 2039–2049. doi:10.1534/g3.119.400083
info:cnr-pdr/source/autori:Mosca, Elena; Cruz, Fernando; Gomez-Garrido, Jessica; Bianco, Luca; Rellstab, Christian; Brodbeck, Sabine; Csillery, Katalin; Fady, Bruno; Fladung, Matthias; Fussi, Barbara; Gomory, Dusan; Gonzalez-Martinez, Santiago C.; Grivet, Delphine; Gut, Marta; Hansen, Ole Kim; Heer, Katrin; Kaya, Zeki; Krutovsky, Konstantin V.; Kersten, Birgit; Liepelt, Sascha; Opgenoorth, Lars; Sperisen, Christoph; Ullrich, Kristian K.; Vendramin, Giovanni G.; Westergren, Marjana; Ziegenhagen, Birgit; Alioto, Tyler; Gugerli, Felix; Heinze, Berthold; Hoehn, Maria; Troggio, Michela; Neale, David B./titolo:A Reference Genome Sequence for the European Silver Fir (Abies alba Mill.): A Community-Generated Genomic Resource/doi:10.1534%2Fg3.119.400083/rivista:G3 (Bethesda Md.)/anno:2019/pagina_da:2039/pagina_a:2049/intervallo_pagine:2039–2049/volume:9
G3: Genes|Genomes|Genetics
Mosca, E, Cruz, F, Gomez-Garrido, J, Bianco, L, Rellstab, C, Brodbeck, S, Csillery, K, Fady, B, Fladung, M, Fussi, B, Gomory, D, Gonzalez-Martinez, S C, Grivet, D, Gut, M, Hansen, O K, Heer, K, Kaya, Z, Krutovsky, K V, Kersten, B, Liepelt, S, Opgenoorth, L, Sperisen, C, Ullrich, K K, Vendramin, G G, Westergren, M, Ziegenhagen, B, Alioto, T, Gugerli, F, Heinze, B, Hoehn, M, Troggio, M & Neale, D B 2019, ' A Reference Genome Sequence for the European Silver Fir ( Abies alba Mill .) : A Community-Generated Genomic Resource ', G3: Genes, Genomes, Genetics (Bethesda), vol. 9, no. 7, pp. 2039-2049 . https://doi.org/10.1534/g3.119.400083
G3: Genes, Genomes, Genetics

Silver fir (Abies alba Mill.) is a keystone conifer of European montane forest ecosystems that has experienced large fluctuations in population size during during the Quaternary and, more recently, due to land-use change. To forecast the species’ f

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6751a2a253ac2c7e7c252ff0c7ba952c
https://escholarship.org/uc/item/4f40w60w

Agronomic evaluation of AABB wheat tetraploids extracted from wheat neo-allohexaploids

Autor: J. Jahier, Virginie Huteau, Olivier Coriton, Denise Deffains

Publikováno v: Euphytica
Euphytica, 2018, 214 (11), pp.212. ⟨10.1007/s10681-018-2293-1⟩

In order to understand if the mechanisms leading to stabilization of hexaploid wheats occurred in early generations after hybridization or accumulated slowly over the evolutionary course, we extracted tetraploids from newly synthesized allohexaploid

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6ec2d5bf7d7291db22ee8666d0ee3e2f
https://doi.org/10.1007/s10681-018-2293-1

Deciphering molecular origin and functional impact of structural variation in maize through genome sequences comparison and integrative analysis of genetic variation, transcriptome and phenotype data

Autor: Joets, Johann, Coursol, Sylvie, Turc, Olivier, Cabrera Bosquet, Llorenç, Martin-Magniette, Marie-Laure, Salvi, Silvio, VENON, Anthony, Chaignon, Sandrine, Laplaige, Jérôme, Gendrot, Ghislaine, Palaffre, Carine, Castel, Stéphanie, Pateyron, Stephanie, Brunaud, Véronique, Taconnat-Soubigou, Ludivine, Dumas, Fabrice, MARANDE, William, Rousselet, Agnes, Belcram, Harry, Charcosset, Alain, Tardieu, Francois, Welcker, Claude, Rogowsky, Peter, Vitte, Clémentine

Publikováno v: 2018; 60. Maize Genetics Conference, Saint-Malo, FRA, 2018-03-22-2018-03-25, 60
60. Maize Genetics Conference
60. Maize Genetics Conference, Mar 2018, Saint-Malo, France. 2018
First International Plant Systems Biology meeting
First International Plant Systems Biology meeting, Sep 2018, Roscoff, France
60. Maize Genetics Conference, Mar 2018, Saint-Malo, France., 2018

International audience; Structural variation (SV) is a major driver of plant adaptation and genome evolution. It originates from transposable element insertion, as well as gene Copy Number (CNV) and Presence/Absence Variation (PAV). Maize is a crop s

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::05d85c0a1a5d03269221264472350e49
http://prodinra.inra.fr/record/427733

Utilisation des transferts horizontaux de gènes pour dater des phylogénies

Autor: Arellano Davin, Adrian

Le fait d'avoir une généalogie datée des organismes vivants est l'un des principaux objectifs de la biologie évolutive. Cette entreprise est confrontée à deux défis majeurs. Le premier est la rareté et l'incomplétude des enregistrements foss

Externí odkaz: http://www.theses.fr/2017LYSE1299