Zobrazeno 1 - 10
of 22
pro vyhledávání: '"Åshild J. Vågene"'
Autor:
Olivia S. Smith, Ophélie Lebrasseur, Nihan D. Dagtas, Nikolay Oskolkov, Miriam J. Bravo-Lopez, Mohamed S. Sarhan, Megan Michel, Meriam van Os, Maria Lopopolo, Markella Moraitou, Kelly E. Blevins, Kevin G. Daly, Julien Fumey, Kadir T. Özdoğan, Jasmin Frangenberg, Javier G. Serrano, James A. Fellows Yates, Valentina Vanghi, Christina Warinner, Sally Wasef, Shreya L. Ramachandran, Piotr Rozwalak, Raphael Eisenhofer, Maxime Borry, Irina M. Velsko, Iseult Jackson, I-Ting Huang, Ian Light, Gabriel Yaxal Ponce-Soto, Gunnar Neumann, Bjørn Peare Bartholdy, Diāna Spurīte, Arthur Kocher, Åshild J. Vågene, Andrea Quagliariello, Anna E. White, Alexander Hübner, Anan Ibrahim, Adrian Forsythe, Aida Andrades Valtueña
Publikováno v:
F1000Research, Vol 12 (2024)
Background Access to sample-level metadata is important when selecting public metagenomic sequencing datasets for reuse in new biological analyses. The Standards, Precautions, and Advances in Ancient Metagenomics community (SPAAM, https://spaam-commu
Externí odkaz:
https://doaj.org/article/7ebc1408c1734656935c58957d2eda4c
Autor:
Åshild J. Vågene, Tanvi P. Honap, Kelly M. Harkins, Michael S. Rosenberg, Karen Giffin, Felipe Cárdenas-Arroyo, Laura Paloma Leguizamón, Judith Arnett, Jane E. Buikstra, Alexander Herbig, Johannes Krause, Anne C. Stone, Kirsten I. Bos
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-12 (2022)
‘Pre-contact era humans from coastal South America were infected by Mycobacterium pinnipedii, most likely, through contact with infected pinnipeds. Here, the authors investigate the presence of M. pinnipedii in pre-contact era humans from inland So
Externí odkaz:
https://doaj.org/article/109eb68bc1de461bb2541844e9995af9
Autor:
James A. Fellows Yates, Aida Andrades Valtueña, Åshild J. Vågene, Becky Cribdon, Irina M. Velsko, Maxime Borry, Miriam J. Bravo-Lopez, Antonio Fernandez-Guerra, Eleanor J. Green, Shreya L. Ramachandran, Peter D. Heintzman, Maria A. Spyrou, Alexander Hübner, Abigail S. Gancz, Jessica Hider, Aurora F. Allshouse, Valentina Zaro, Christina Warinner
Publikováno v:
Scientific Data, Vol 8, Iss 1, Pp 1-8 (2021)
Measurement(s) genome • Metagenome • Metadata • Ancient DNA Technology Type(s) digital curation Factor Type(s) geographic location • sample age Machine-accessible metadata file describing the reported data: https://doi.org/10.6084/m9.figshare
Externí odkaz:
https://doaj.org/article/df8cfd115e7446e0af226b34d5094221
Autor:
Susanna Sabin, Alexander Herbig, Åshild J. Vågene, Torbjörn Ahlström, Gracijela Bozovic, Caroline Arcini, Denise Kühnert, Kirsten I. Bos
Publikováno v:
Genome Biology, Vol 21, Iss 1, Pp 1-24 (2020)
Abstract Background Although tuberculosis accounts for the highest mortality from a bacterial infection on a global scale, questions persist regarding its origin. One hypothesis based on modern Mycobacterium tuberculosis complex (MTBC) genomes sugges
Externí odkaz:
https://doaj.org/article/10aeed7bf557409b90db23ff5640aa17
Autor:
Theis Z. T. Jensen, Jonas Niemann, Katrine Højholt Iversen, Anna K. Fotakis, Shyam Gopalakrishnan, Åshild J. Vågene, Mikkel Winther Pedersen, Mikkel-Holger S. Sinding, Martin R. Ellegaard, Morten E. Allentoft, Liam T. Lanigan, Alberto J. Taurozzi, Sofie Holtsmark Nielsen, Michael W. Dee, Martin N. Mortensen, Mads C. Christensen, Søren A. Sørensen, Matthew J. Collins, M. Thomas P. Gilbert, Martin Sikora, Simon Rasmussen, Hannes Schroeder
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-10 (2019)
Birch pitch is thought to have been used in prehistoric times as hafting material or antiseptic and tooth imprints suggest that it was chewed. Here, the authors report a 5,700 year-old piece of chewed birch pitch from Denmark from which they successf
Externí odkaz:
https://doaj.org/article/10bd3911551a479eb24e7f5a79259cca
Autor:
Clio Der Sarkissian, Irina M. Velsko, Anna K. Fotakis, Åshild J. Vågene, Alexander Hübner, James A. Fellows Yates
Publikováno v:
mSystems, Vol 6, Iss 6 (2021)
ABSTRACT Like modern metagenomics, ancient metagenomics is a highly data-rich discipline, with the added challenge that the DNA of interest is degraded and, depending on the sample type, in low abundance. This requires the application of specialized
Externí odkaz:
https://doaj.org/article/0be74e2895004f2f947b34cdc1fb101a
Autor:
Joscha Gretzinger, Duncan Sayer, Pierre Justeau, Eveline Altena, Maria Pala, Katharina Dulias, Ceiridwen J. Edwards, Susanne Jodoin, Laura Lacher, Susanna Sabin, Åshild J. Vågene, Wolfgang Haak, S. Sunna Ebenesersdóttir, Kristjan H. S. Moore, Rita Radzeviciute, Kara Schmidt, Selina Brace, Martina Abenhus Bager, Nick Patterson, Luka Papac, Nasreen Broomandkhoshbacht, Kimberly Callan, Éadaoin Harney, Lora Iliev, Ann Marie Lawson, Megan Michel, Kristin Stewardson, Fatma Zalzala, Nadin Rohland, Stefanie Kappelhoff-Beckmann, Frank Both, Daniel Winger, Daniel Neumann, Lars Saalow, Stefan Krabath, Sophie Beckett, Melanie Van Twest, Neil Faulkner, Chris Read, Tabatha Barton, Joanna Caruth, John Hines, Ben Krause-Kyora, Ursula Warnke, Verena J. Schuenemann, Ian Barnes, Hanna Dahlström, Jane Jark Clausen, Andrew Richardson, Elizabeth Popescu, Natasha Dodwell, Stuart Ladd, Tom Phillips, Richard Mortimer, Faye Sayer, Diana Swales, Allison Stewart, Dominic Powlesland, Robert Kenyon, Lilian Ladle, Christina Peek, Silke Grefen-Peters, Paola Ponce, Robin Daniels, Cecily Spall, Jennifer Woolcock, Andy M. Jones, Amy V. Roberts, Robert Symmons, Anooshka C. Rawden, Alan Cooper, Kirsten I. Bos, Tom Booth, Hannes Schroeder, Mark G. Thomas, Agnar Helgason, Martin B. Richards, David Reich, Johannes Krause, Stephan Schiffels
Publikováno v:
Nature
Gretzinger, J, Sayer, D, Justeau, P, Altena, E, Pala, M, Dulias, K, Edwards, C J, Jodoin, S, Lacher, L, Sabin, S, Vågene, Å J, Haak, W, Ebenesersdóttir, S S, Moore, K H S, Radzeviciute, R, Schmidt, K, Brace, S, Bager, M A, Patterson, N, Papac, L, Broomandkhoshbacht, N, Callan, K, Harney, É, Iliev, L, Lawson, A M, Michel, M, Stewardson, K, Zalzala, F, Rohland, N, Kappelhoff-Beckmann, S, Both, F, Winger, D, Neumann, D, Saalow, L, Krabath, S, Beckett, S, Van Twest, M, Faulkner, N, Read, C, Barton, T, Caruth, J, Hines, J, Krause-Kyora, B, Warnke, U, Schuenemann, V J, Barnes, I, Dahlström, H, Clausen, J J, Richardson, A, Popescu, E, Dodwell, N, Ladd, S, Phillips, T, Mortimer, R, Sayer, F, Swales, D, Stewart, A, Powlesland, D, Kenyon, R, Ladle, L, Peek, C, Grefen-Peters, S, Ponce, P, Daniels, R, Spall, C, Woolcock, J, Jones, A M, Roberts, A V, Symmons, R, Rawden, A C, Cooper, A, Bos, K I, Booth, T, Schroeder, H, Thomas, M G, Helgason, A, Richards, M B, Reich, D, Krause, J & Schiffels, S 2022, ' The Anglo-Saxon migration and the formation of the early English gene pool ', Nature, vol. 610, pp. 112-119 . https://doi.org/10.1038/s41586-022-05247-2
Nature, 610(7930), 112-+. NATURE PORTFOLIO
Gretzinger, J, Sayer, D, Justeau, P, Altena, E, Pala, M, Dulias, K, Edwards, C J, Jodoin, S, Lacher, L, Sabin, S, Vågene, Å J, Haak, W, Ebenesersdóttir, S S, Moore, K H S, Radzeviciute, R, Schmidt, K, Brace, S, Bager, M A, Patterson, N, Papac, L, Broomandkhoshbacht, N, Callan, K, Harney, É, Iliev, L, Lawson, A M, Michel, M, Stewardson, K, Zalzala, F, Rohland, N, Kappelhoff-Beckmann, S, Both, F, Winger, D, Neumann, D, Saalow, L, Krabath, S, Beckett, S, Van Twest, M, Faulkner, N, Read, C, Barton, T, Caruth, J, Hines, J, Krause-Kyora, B, Warnke, U, Schuenemann, V J, Barnes, I, Dahlström, H, Clausen, J J, Richardson, A, Popescu, E, Dodwell, N, Ladd, S, Phillips, T, Mortimer, R, Sayer, F, Swales, D, Stewart, A, Powlesland, D, Kenyon, R, Ladle, L, Peek, C, Grefen-Peters, S, Ponce, P, Daniels, R, Spall, C, Woolcock, J, Jones, A M, Roberts, A V, Symmons, R, Rawden, A C, Cooper, A, Bos, K I, Booth, T, Schroeder, H, Thomas, M G, Helgason, A, Richards, M B, Reich, D, Krause, J & Schiffels, S 2022, ' The Anglo-Saxon migration and the formation of the early English gene pool ', Nature, vol. 610, pp. 112-119 . https://doi.org/10.1038/s41586-022-05247-2
Nature, 610(7930), 112-+. NATURE PORTFOLIO
The history of the British Isles and Ireland is characterized by multiple periods of major cultural change, including the influential transformation after the end of Roman rule, which precipitated shifts in language, settlement patterns and material
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b5be5e57f72b6a17148e0cefd0aa7636
https://eprints.bournemouth.ac.uk/37579/1/s41586-022-05247-2.pdf
https://eprints.bournemouth.ac.uk/37579/1/s41586-022-05247-2.pdf
Autor:
Gunnar U. Neumann, Noah Steuri, Luis Roger Esquivel-Gomez, Alexander Herbig, Cosimo Posth, Kirsten I. Bos, Maria A. Spyrou, Marianne Ramstein, Monica Zavattaro, Jessica Beckett, Aleksandr Khokhlov, Philipp W. Stockhammer, Matthias Meyer, Maria Giuseppina Gradoli, Susanna Sabin, Stefania Vai, Ron Hübler, Wolfgang Haak, Alessandro Riga, Johannes Krause, Denise Kühnert, Antje Wissgott, Aditya Kumar Lankapalli, Felix M. Key, Anatoly R. Kantorovich, Yılmaz Selim Erdal, Albert Hafner, David Caramelli, Robin Skeates, Anja Furtwängler, Åshild J. Vågene, Sandra Lösch, Mark Achtman, Rezeda I. Tukhbatova, Marta Burri, Sabine Reinhold, Andrey B. Belinsky, Zhemin Zhou, Sarah Nagel, Vladimir E. Maslov, Svend Hansen, Nabil-Fareed Alikhan, Inga Siebke, Alexey Kalmykov, Andrey A. Chizhevsky
Publikováno v:
Nature ecology & evolution
It has been hypothesized that the Neolithic transition towards an agricultural and pastoralist economy facilitated the emergence of human adapted pathogens. Here, we recovered eight Salmonella enterica subsp. enterica genomes from human skeletons of
Autor:
Shyam Gopalakrishnan, S. Sunna Ebenesersdóttir, Inge K.C. Lundstrøm, Gordon Turner-Walker, Kristjan H.S. Moore, Pierre Luisi, Ashot Margaryan, Michael D. Martin, Martin Rene Ellegaard, Ólafur þ. Magnússon, Ásgeir Sigurðsson, Steinunn Snorradóttir, Droplaug N. Magnúsdóttir, Jason E. Laffoon, Lucy van Dorp, Xiaodong Liu, Ida Moltke, María C. Ávila-Arcos, Joshua G. Schraiber, Simon Rasmussen, David Juan, Pere Gelabert, Toni de-Dios, Anna K. Fotakis, Miren Iraeta-Orbegozo, Åshild J. Vågene, Sean Dexter Denham, Axel Christophersen, Hans K. Stenøien, Filipe G. Vieira, Shanlin Liu, Torsten Günther, Toomas Kivisild, Ole Georg Moseng, Birgitte Skar, Christina Cheung, Marcela Sandoval-Velasco, Nathan Wales, Hannes Schroeder, Paula F. Campos, Valdís B. Guðmundsdóttir, Thomas Sicheritz-Ponten, Bent Petersen, Jostein Halgunset, Edmund Gilbert, Gianpiero L. Cavalleri, Eivind Hovig, Ingrid Kockum, Tomas Olsson, Lars Alfredsson, Thomas F. Hansen, Thomas Werge, Eske Willerslev, Francois Balloux, Tomas Marques-Bonet, Carles Lalueza-Fox, Rasmus Nielsen, Kári Stefánsson, Agnar Helgason, M. Thomas P. Gilbert
Publikováno v:
4743-4751.e1-e6
Current Biology
Dipòsit Digital de Documents de la UAB
Universitat Autònoma de Barcelona
Gopalakrishnan, S, Ebenesersdóttir, S S, Lundstrøm, I K C, Turner-Walker, G, Moore, K H S, Luisi, P, Margaryan, A, Martin, M D, Ellegaard, M R, Magnússon, Ó, Sigurðsson, Á, Snorradóttir, S, Magnúsdóttir, D N, Laffoon, J E, van Dorp, L, Liu, X, Moltke, I, Ávila-Arcos, M C, Schraiber, J G, Rasmussen, S, Juan, D, Gelabert, P, de-Dios, T, Fotakis, A K, Iraeta-Orbegozo, M, Vågene, Å J, Denham, S D, Christophersen, A, Stenøien, H K, Vieira, F G, Liu, S, Günther, T, Kivisild, T, Moseng, O G, Skar, B, Cheung, C, Sandoval-Velasco, M, Wales, N, Schroeder, H, Campos, P F, Guðmundsdóttir, V B, Sicheritz-Ponten, T, Petersen, B, Halgunset, J, Gilbert, E, Cavalleri, G L, Hovig, E, Kockum, I, Olsson, T, Alfredsson, L, Hansen, T F, Werge, T, Willerslev, E, Balloux, F, Marques-Bonet, T, Lalueza-Fox, C, Nielsen, R, Stefánsson, K, Helgason, A & Gilbert, M T P 2022, ' The population genomic legacy of the second plague pandemic ', Current Biology, vol. 32, no. 21, pp. 4743-4751.e6 . https://doi.org/10.1016/j.cub.2022.09.023
e6
Current Biology
Dipòsit Digital de Documents de la UAB
Universitat Autònoma de Barcelona
Gopalakrishnan, S, Ebenesersdóttir, S S, Lundstrøm, I K C, Turner-Walker, G, Moore, K H S, Luisi, P, Margaryan, A, Martin, M D, Ellegaard, M R, Magnússon, Ó, Sigurðsson, Á, Snorradóttir, S, Magnúsdóttir, D N, Laffoon, J E, van Dorp, L, Liu, X, Moltke, I, Ávila-Arcos, M C, Schraiber, J G, Rasmussen, S, Juan, D, Gelabert, P, de-Dios, T, Fotakis, A K, Iraeta-Orbegozo, M, Vågene, Å J, Denham, S D, Christophersen, A, Stenøien, H K, Vieira, F G, Liu, S, Günther, T, Kivisild, T, Moseng, O G, Skar, B, Cheung, C, Sandoval-Velasco, M, Wales, N, Schroeder, H, Campos, P F, Guðmundsdóttir, V B, Sicheritz-Ponten, T, Petersen, B, Halgunset, J, Gilbert, E, Cavalleri, G L, Hovig, E, Kockum, I, Olsson, T, Alfredsson, L, Hansen, T F, Werge, T, Willerslev, E, Balloux, F, Marques-Bonet, T, Lalueza-Fox, C, Nielsen, R, Stefánsson, K, Helgason, A & Gilbert, M T P 2022, ' The population genomic legacy of the second plague pandemic ', Current Biology, vol. 32, no. 21, pp. 4743-4751.e6 . https://doi.org/10.1016/j.cub.2022.09.023
e6
Human populations have been shaped by catastrophes that may have left long-lasting signatures in their genomes. One notable example is the second plague pandemic that entered Europe in ca. 1,347 CE and repeatedly returned for over 300 years, with typ
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4eac41af2a2c01f0ba22bccf88427d14
https://hdl.handle.net/11250/3053211
https://hdl.handle.net/11250/3053211
Autor:
Martina Lari, Stefania Vai, Alessandro Riga, Johannes Krause, Alessandra Sperduti, Alessandra Modi, Luca Cappuccini, Rita Radzevičiūtė, Kirsten I. Bos, Alexander Peltzer, Stefano Ricci, Åshild J. Vågene, Hannah Frenzel, Guido Alberto Gnecchi-Ruscone, Luca Bondioli, Lorenzo M. Bondioli, Guus Kroonen, Maria Angela Turchetti, Cosimo Posth, Angela Mötsch, Monica Zavattaro, Guido Barbujani, Ivan Martini, Eva Fernández-Domínguez, Kathrin Nägele, David Caramelli, Andrea Zifferero, Valentina Zaro, Francesco Boschin, Maria A. Spyrou, Giulia Capecchi, Adriana Moroni, Elsa Pacciani, Michael McCormick, Elizabeth A. Nelson, Cäcilia Freund, Wolfgang Haak, Henrike O. Heyne
Publikováno v:
Science advances, 2021, Vol.7(39) [Peer Reviewed Journal]
Science Advances
Science Advances, 7(39), 1-15. AMER ASSOC ADVANCEMENT SCIENCE
Posth, C, Zaro, V, Spyrou, M A, Vai, S, Gnecchi-Ruscone, G A, Modi, A, Peltzer, A, Mötsch, A, Nägele, K, Vågene, Å J, Nelson, E A, Radzeviciute, R, Freund, C, Bondioli, L M, Cappuccini, L, Frenzel, H, Pacciani, E, Boschin, F, Capecchi, G, Martini, I, Moroni, A, Ricci, S, Sperduti, A, Turchetti, M A, Riga, A, Zavattaro, M, Zifferero, A, Heyne, H O, Fernández-Domínguez, E, Kroonen, G J, McCormick, M, Haak, W, Lari, M, Barbujani, G, Bondioli, L, Bos, K I, Caramelli, D & Krause, J 2021, ' The origin and legacy of the Etruscans through a 2000-year archeogenomic time transect ', Science Advances, vol. 7, no. 39, eabi7673 . https://doi.org/10.1126/sciadv.abi7673
Science Advances
Science Advances, 7(39), 1-15. AMER ASSOC ADVANCEMENT SCIENCE
Posth, C, Zaro, V, Spyrou, M A, Vai, S, Gnecchi-Ruscone, G A, Modi, A, Peltzer, A, Mötsch, A, Nägele, K, Vågene, Å J, Nelson, E A, Radzeviciute, R, Freund, C, Bondioli, L M, Cappuccini, L, Frenzel, H, Pacciani, E, Boschin, F, Capecchi, G, Martini, I, Moroni, A, Ricci, S, Sperduti, A, Turchetti, M A, Riga, A, Zavattaro, M, Zifferero, A, Heyne, H O, Fernández-Domínguez, E, Kroonen, G J, McCormick, M, Haak, W, Lari, M, Barbujani, G, Bondioli, L, Bos, K I, Caramelli, D & Krause, J 2021, ' The origin and legacy of the Etruscans through a 2000-year archeogenomic time transect ', Science Advances, vol. 7, no. 39, eabi7673 . https://doi.org/10.1126/sciadv.abi7673
Description
Steppe ancestry among the non–Indo-European–speaking Etruscans challenges previous hypotheses on their recent Anatolian origin.
The origin, development, and legacy of the enigmatic Etruscan civilization from the central regi
Steppe ancestry among the non–Indo-European–speaking Etruscans challenges previous hypotheses on their recent Anatolian origin.
The origin, development, and legacy of the enigmatic Etruscan civilization from the central regi