Identifying genes associated with genetic control of color polymorphism in the pearl oyster Pinctada margaritifera var. cumingii (Linnaeus 1758) using a comparative whole genome pool‐sequencing approach

Autor: Pierre‐Louis Stenger, Chin‐Long Ky, Jeremie Vidal‐Dupiol, Serge Planes, Céline Reisser

Publikováno v: Evolutionary Applications
Evolutionary Applications, 2022, ⟨10.1111/eva.13464⟩
Evolutionary Applications (1752-4571) (Wiley), 2023-02, Vol. 16, N. 2, P. 408-427

International audience; For hundreds of years, the color diversity of Mollusca shells has been a topic of interest for humanity. However, the genetic control underlying color expression is still poorly understood in mollusks. The pearl oyster Pinctad

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6dbb8bdf90a3b8eb1cfff3895e51e85e
https://doi.org/10.1111/eva.13464

Endoparasitoid lifestyle promotes endogenization and domestication of dsDNA viruses

Autor: Benjamin Guinet, David Lepetit, Sylvain Charlat, Peter N Buhl, David G Notton, Astrid Cruaud, Jean-Yves Rasplus, Julia Stigenberg, Damien M. de Vienne, Boussau Bastien, Julien Varaldi

Publikováno v: eLife
eLife, 2023, 12, pp.e85993. ⟨10.7554/eLife.85993⟩

All sequencing data are available at NCBI via the BioProject accession number NCBI: PRJNA826991. All scripts and additional tables as well as all cluster phylogeny figures are available under the github repository : (BenjaminGuinet/Viral-domesticatio

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::260ad193c26798f02fb19bb52aef04e6
https://hal.science/hal-03861307v2/document

Analysis of the P. lividus sea urchin genome highlights contrasting trends of genomic and regulatory evolution in deuterostomes

Autor: Ferdinand Marlétaz, Arnaud Couloux, Julie Poulain, Karine Labadie, Corinne Da Silva, Sophie Mangenot, Benjamin Noel, Albert J. Poustka, Philippe Dru, Cinta Pegueroles, Marco Borra, Elijah K. Lowe, Guy Lhomond, Lydia Besnardeau, Stéphanie Le Gras, Tao Ye, Daria Gavriouchkina, Roberta Russo, Caterina Costa, Francesca Zito, Letizia Anello, Aldo Nicosia, Maria Antonietta Ragusa, Marta Pascual, M. Dolores Molina, Aline Chessel, Marta Di Carlo, Xavier Turon, Richard R. Copley, Jean-Yves Exposito, Pedro Martinez, Vincenzo Cavalieri, Smadar Ben Tabou de Leon, Jenifer Croce, Paola Oliveri, Valeria Matranga, Maria Di Bernardo, Julia Morales, Patrick Cormier, Anne-Marie Geneviève, Jean Marc Aury, Valérie Barbe, Patrick Wincker, Maria Ina Arnone, Christian Gache, Thierry Lepage

Publikováno v: Cell Genom
Cell Genomics
Cell Genomics, 2023, 3 (4), pp.100295. ⟨10.1016/j.xgen.2023.100295⟩

International audience; Sea urchins are emblematic models in developmental biology and display several characteristics that set them apart from other deuterostomes. To uncover the genomic cues that may underlie these specificities, we generated a chr

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d287e13b2b25b32de6496d1c3229fdc1
http://hdl.handle.net/2445/197226

Whole-genome sequencing of cryopreserved resources from French Large White pigs at two distinct sampling times reveals strong signatures of convergent and divergent selection between the dam and sire lines

Autor: Simon Boitard, Laurence Liaubet, Cyriel Paris, Katia Fève, Patrice Dehais, Alban Bouquet, Juliette Riquet, Marie-José Mercat

Publikováno v: Genetics Selection Evolution
Genetics Selection Evolution, 2023, 55, pp.13. ⟨10.1186/s12711-023-00789-z⟩

Background Numerous genomic scans for positive selection have been performed in livestock species within the last decade, but often a detailed characterization of the detected regions (gene or trait under selection, timing of selection events) is lac

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7e9c4705d170a29ee4d97d96484ebdeb
https://doi.org/10.1186/s12711-023-00789-z

An ancient truncated duplication of the anti‐Müllerian hormone receptor type 2 gene is a potential conserved master sex determinant in the Pangasiidae catfish family

Autor: Ming Wen, Qiaowei Pan, Elodie Jouanno, Jerome Montfort, Margot Zahm, Cédric Cabau, Christophe Klopp, Carole Iampietro, Céline Roques, Olivier Bouchez, Adrien Castinel, Cécile Donnadieu, Hugues Parrinello, Charles Poncet, Elodie Belmonte, Véronique Gautier, Jean-Christophe Avarre, Remi Dugue, Rudhy Gustiano, Trần Thị Thúy Hà, Marc Campet, Kednapat Sriphairoj, Josiane Ribolli, Fernanda L. de Almeida, Thomas Desvignes, John H. Postlethwait, Christabel Floi Bucao, Marc Robinson-Rechavi, Julien Bobe, Amaury Herpin, Yann Guiguen

Publikováno v: Molecular Ecology Resources
Molecular Ecology Resources, 2022, 18 p. ⟨10.1111/1755-0998.13620⟩
Molecular ecology resources, vol. 22, no. 6, pp. 2411-2428
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA-Alice)
Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA

The evolution of sex determination (SD) mechanisms in teleost fishes is amazingly dynamic, as reflected by the variety of different master sex-determining genes identified, even sometimes among closely related species. Pangasiids are a group of econo

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::34a5e87675fa171ef10509de05ec1e78
https://doi.org/10.1111/1755-0998.13620