Zobrazeno 81 - 90
of 104
pro vyhledávání: '"Georg Zeller"'
Autor:
Sascha Laubinger, Timo Sachsenberg, Georg Zeller, Detlef Weigel, Stefan R. Henz, Jiawei Wang, Sabine Buechel, Gunnar Rätsch
In Arabidopsis thaliana , four different dicer-like (DCL) proteins have distinct but partially overlapping functions in the biogenesis of microRNAs (miRNAs) and siRNAs from longer, noncoding precursor RNAs. To analyze the impact of different componen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::78c2b721a85caf38e65617d269a8f0d9
https://europepmc.org/articles/PMC2955092/
https://europepmc.org/articles/PMC2955092/
Autor:
Huan Shu, Marnik Vuylsteke, Catharine Aquino, Sascha Laubinger, Georg Zeller, Andrea Patrignani, Hubert Rehrauer, Wilhelm Gruissem, Stefan R. Henz, Pierre Hilson, Lars Hennig, Yves Van de Peer, Stephane Rombauts, Naïra Naouar, Detlef Weigel
Transcriptome profiling has become a routine tool in biology. For Arabidopsis (Arabidopsis thaliana), the Affymetrix ATH1 expression array is most commonly used, but it lacks about one-third of all annotated genes present in the reference strain. An
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::167476855f16bc71b27e84936c4dd346
https://www.zora.uzh.ch/id/eprint/35670/
https://www.zora.uzh.ch/id/eprint/35670/
Autor:
Carlos Bustamante, David Cox, C. Robin Buell, Georg Zeller, Kelly A. Frazer, Richard Bruskiewich, Richard M. Clark, Kenneth L. McNally, Douglas R. Hoen, Hei Leung, Regina Bohnert, Dennis G. Ballinger, David J. Mackill, Thomas E. Bureau, Keyan Zhao, Detlef Weigel, Badri Padhukasahasram, Renee Stokowski, Kevin L. Childs, Victor Jun Ulat, Rebecca M. Davidson, Gunnar Rätsch, Jan E. Leach
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America. 106(30)
Rice, the primary source of dietary calories for half of humanity, is the first crop plant for which a high-quality reference genome sequence from a single variety was produced. We used resequencing microarrays to interrogate 100 Mb of the unique fra
Autor:
Alexander Zien, Gabriele Schweikert, Sören Sonnenburg, Georg Zeller, Gunnar Rätsch, Jonas Behr, Cheng Soon Ong
Publikováno v:
Nucleic Acids Research
Schweikert, G, Behr, J, Zien, A, Zeller, G, Ong, C S, Sonnenburg, S & Rätsch, G 2009, ' mGene.web: a web service for accurate computational gene finding ', Nucleic Acids Research, vol. 37, no. 2 . https://doi.org/10.1093/nar/gkp479
Nucleic Acids Research (London)
Schweikert, G, Behr, J, Zien, A, Zeller, G, Ong, C S, Sonnenburg, S & Rätsch, G 2009, ' mGene.web: a web service for accurate computational gene finding ', Nucleic Acids Research, vol. 37, no. 2 . https://doi.org/10.1093/nar/gkp479
Nucleic Acids Research (London)
We describe mGene.web, a web service for the genome-wide prediction of protein coding genes from eukaryotic DNA sequences. It offers pre-trained models for the recognition of gene structures including untranslated regions in an increasing number of o
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6a58aaaa51a039a97f6d93f843280a32
https://publica.fraunhofer.de/handle/publica/220922
https://publica.fraunhofer.de/handle/publica/220922
Autor:
Alexander Zien, Gabriele Schweikert, Lisa Hartmann, Gunnar Rätsch, Cheng Soon Ong, Nina Krüger, Petra Philips, Anja Bohlen, Georg Zeller, Sören Sonnenburg, Fabio De Bona, Jonas Behr, Christoph Dieterich
Publikováno v:
Genome Research
We present a highly accurate gene-prediction system for eukaryotic genomes, called mGene. It combines in an unprecedented manner the flexibility of generalized hidden Markov models (gHMMs) with the predictive power of modern machine learning methods,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fb7d9f819dd81ef1fea67b90057ded47
https://publica.fraunhofer.de/handle/publica/219907
https://publica.fraunhofer.de/handle/publica/219907
Autor:
Paul Van Hummelen, Naïra Naouar, Dirk Inzé, Georg Zeller, Gunnar Rätsch, Marnik Vuylsteke, Martin Kuiper, Tim Lammens, Tineke Casneuf, Lieven De Veylder, Klaas Vandepoele, Detlef Weigel
Publikováno v:
The Plant journal : for cell and molecular biology. 57(1)
The Affymetrix ATH1 array provides a robust standard tool for transcriptome analysis, but unfortunately does not represent all of the transcribed genes in Arabidopsis thaliana. Recently, Affymetrix has introduced its Arabidopsis Tiling 1.0R array, wh
Autor:
Gunnar Rätsch, Georg Zeller, Detlef Weigel, Timo Sachsenberg, Jan U. Lohmann, Wolfgang Busch, Sascha Laubinger
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America. 105(25)
The processing of Arabidopsis thaliana microRNAs (miRNAs) from longer primary transcripts (pri-miRNAs) requires the activity of several proteins, including DICER-LIKE1 (DCL1), the double-stranded RNA-binding protein HYPONASTIC LEAVES1 (HYL1), and the
Autor:
Sascha, Laubinger, Georg, Zeller, Stefan R, Henz, Timo, Sachsenberg, Christian K, Widmer, Naïra, Naouar, Marnik, Vuylsteke, Bernhard, Schölkopf, Gunnar, Rätsch, Detlef, Weigel
Publikováno v:
Genome Biology
A developmental expression atlas, At-TAX, based on whole-genome tiling arrays, is presented along with associated analysis methods.
Gene expression maps for model organisms, including Arabidopsis thaliana, have typically been created using gene-
Gene expression maps for model organisms, including Arabidopsis thaliana, have typically been created using gene-
Autor:
Georg Zeller, Anja Bohlen, Gunnar Rätsch, Korbinian Schneeberger, Richard M. Clark, Detlef Weigel
Publikováno v:
Genome Research
Whole-genome oligonucleotide resequencing arrays have allowed the comprehensive discovery of single nucleotide polymorphisms (SNPs) in eukaryotic genomes of moderate to large size. With this technology, the detection rate for isolated SNPs is typical
Autor:
Richard M. Clark, Joseph R. Ecker, Kelly A. Frazer, Christopher Toomajian, Huaming Chen, Glenn Fu, Norman Warthmann, Georg Zeller, Bernhard Schölkopf, Magnus Nordborg, Tina T. Hu, Detlef Weigel, Gunnar Rätsch, Paul Shinn, Stephan Ossowski, Gabriele Schweikert, David A. Hinds, Daniel H. Huson
Publikováno v:
Science
The genomes of individuals from the same species vary in sequence as a result of different evolutionary processes. To examine the patterns of, and the forces shaping, sequence variation in Arabidopsis thaliana , we performed high-density array resequ