Zobrazeno 1 - 10
of 15
pro vyhledávání: '"Brian P. Hedlund"'
Autor:
Paul N. Evans, Philip Hugenholtz, Jiarui Sun, Christian Rinke, Tanja Woyke, Emma J. Gagen, Ben J. Woodcroft, Brian P. Hedlund
Publikováno v:
ISME Communications. 1
Asgardarchaeota have been proposed as the closest living relatives to eukaryotes, and a total of 72 metagenome-assembled genomes (MAGs) representing six primary lineages in this archaeal phylum have thus far been described. These organisms are predic
Autor:
Emma J. Gagen, Ben J. Woodcroft, Jiarui Sun, Brian P. Hedlund, Christian Rinke, Paul N. Evans, Philip Hugenholtz, Tanja Woyke
Asgardarchaeota have been proposed as the closest living relatives to eukaryotes, and a total of 72 metagenome-assembled genomes (MAGs) representing six primary lineages in this archaeal phylum have thus far been described. These organisms are predic
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7d64405b39924e6f737c3c89787600f4
https://doi.org/10.1101/2021.02.19.431964
https://doi.org/10.1101/2021.02.19.431964
Autor:
Yan-Ni Qu, Wen-Sheng Shu, Yang Zhi Rao, Yu Xian Li, Wael N. Hozzein, Brian P. Hedlund, Ya Ting Chen, Wen-Jun Li, Paul N. Evans, Yulin Wang, Gene W. Tyson, Zheng-Shuang Hua, Tong Zhang, Min Jun Huang, Jian-Yu Jiao, Kian Mau Goh, Yan Ping Mao, Yan Ling Qi
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-11 (2019)
Nature Communications
Nature Communications
Several recent studies have shown the presence of genes for the key enzyme associated with archaeal methane/alkane metabolism, methyl-coenzyme M reductase (Mcr), in metagenome-assembled genomes (MAGs) divergent to existing archaeal lineages. Here, we
Autor:
Jeremy A. Dodsworth, Brian P. Hedlund, Wesley D. Swingley, Hailiang Dong, Jad Kanbar, Iwijn De Vlaminck, Stephen R. Quake, Eric D. Becraft, Brandon R. Briggs, Senthil K. Murugapiran, J. Ingemar Ohlsson
Publikováno v:
Applied and Environmental Microbiology. 82:992-1003
The vast majority of microbial life remains uncatalogued due to the inability to cultivate these organisms in the laboratory. This “microbial dark matter” represents a substantial portion of the tree of life and of the populations that contribute
Autor:
Stephen E. Grasby, Allyson L. Brady, Danielle Goudeau, Edward M. Rubin, Rex R. Malmstrom, Brandon R. Briggs, David Paez-Espino, Brian P. Hedlund, Jennifer Pett-Ridge, Jessica K. Jarett, Emiley A. Eloe-Fadrosh, Natalia Ivanova, Anne E. Dekas, Peter F. Dunfield, Amrita Pati, Hailiang Dong, Nikos C. Kyrpides, Wen-Jun Li, Tanja Woyke
Publikováno v:
Nature Communications, Vol 7, Iss 1, Pp 1-10 (2016)
Nature communications, vol 7, iss 1
Nature Communications
Eloe-Fadrosh, EA; Paez-Espino, D; Jarett, J; Dunfield, PF; Hedlund, BP; Dekas, AE; et al.(2016). Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs. Nature Communications, 7. doi: 10.1038/ncomms10476. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/0pw5c72r
Nature communications, vol 7, iss 1
Nature Communications
Eloe-Fadrosh, EA; Paez-Espino, D; Jarett, J; Dunfield, PF; Hedlund, BP; Dekas, AE; et al.(2016). Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs. Nature Communications, 7. doi: 10.1038/ncomms10476. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/0pw5c72r
Analysis of the increasing wealth of metagenomic data collected from diverse environments can lead to the discovery of novel branches on the tree of life. Here we analyse 5.2 Tb of metagenomic data collected globally to discover a novel bacterial phy
Publikováno v:
Extremophiles. 18:865-875
Despite >130 years of microbial cultivation studies, many microorganisms remain resistant to traditional cultivation approaches, including numerous candidate phyla of bacteria and archaea. Unraveling the mysteries of these candidate phyla is a grand
Autor:
Masaru K. Nobu, Henrik Sass, Bo Barker Jørgensen, Andrew J. Weightman, Esther A. Gies, Brian P. Hedlund, Christian Rinke, Senthil K. Murugapiran, Steven J. Hallam, Gordon Webster, Peter Kille, R. John Parkes, George Tsiamis, Jeremy A. Dodsworth, Patrick Schwientek, Tanja Woyke, Wen Tso Liu
Publikováno v:
Nobu, M K, Dodsworth, J A, Murugapiran, S K, Rinke, C, Gies, E A, Webster, G, Schwientek, P, Kille, P, Parkes, R J, Sass, H, Jørgensen, B B, Weightman, A J, Liu, W-T, Hallam, S J, Tsiamis, G, Woyke, T & Hedlund, B P 2016, ' Phylogeny and physiology of candidate phylum 'Atribacteria' (OP9/JS1) inferred from cultivation-independent genomics ', I S M E Journal, vol. 10, no. 2, pp. 273-86 . https://doi.org/10.1038/ismej.2015.97
The 'Atribacteria' is a candidate phylum in the Bacteria recently proposed to include members of the OP9 and JS1 lineages. OP9 and JS1 are globally distributed, and in some cases abundant, in anaerobic marine sediments, geothermal environments, anaer
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7fd84d2928d0814f4452685cbbf19fdb
https://europepmc.org/articles/PMC4737943/
https://europepmc.org/articles/PMC4737943/
Publikováno v:
Systematic and applied microbiology. 38(4)
a b s t r a c t A vast diversity of Bacteria and Archaea exists in nature that has evaded axenic culture. Advance- ments in single-cell genomics, metagenomics, and molecular microbial ecology approaches provide ever-improving insight into the biology
Autor:
Brian P. Hedlund
Publikováno v:
Bergey's Manual of Systematics of Archaea and Bacteria
Ver.ru'co.mi.cro'bi.a. N.L. fem. pl. n. Verrucomicobiales type order of the phylum; N.L. neut. pl. n. Verrucomicrobia the Verrucomicrobiales phylum. Verrucomicrobia Keywords: Verrucomicrobia phyl. nov.; Verrucomicrobiales
Autor:
Patrick S. G. Chain, Susannah G. Tringe, Brian P. Hedlund, Wesley D. Swingley, Chien Chi Lo, Senthil K. Murugapiran, Jeremy A. Dodsworth, Paul C. Blainey, Matthew B. Scholz, Jason Raymond, Stephen R. Quake, Christian A. Ross
Publikováno v:
PMC
Nature communications
Nature communications
OP9 is a yet-uncultivated bacterial lineage found in geothermal systems, petroleum reservoirs, anaerobic digesters and wastewater treatment facilities. Here we use single-cell and metagenome sequencing to obtain two distinct, nearly complete OP9 geno