Zobrazeno 1 - 10
of 23
pro vyhledávání: '"Namrata D. Udeshi"'
Autor:
Song-Yi Lee, Joleen S. Cheah, Boxuan Zhao, Charles Xu, Heegwang Roh, Christina K. Kim, Kelvin F. Cho, Namrata D. Udeshi, Steven A. Carr, Alice Y. Ting
Publikováno v:
bioRxiv
The incorporation of light-responsive domains into engineered proteins has enabled control of protein localization, interactions, and function with light. We integrated optogenetic control into proximity labeling (PL), a cornerstone technique for hig
Autor:
Kshiti Meera Phulphagar, Claudia Ctortecka, Alvaro Sebastian Vaca Jacome, Susan Klaeger, Eva K. Verzani, Gabrielle M. Hernandez, Namrata D. Udeshi, Karl R. Clauser, Jennifer G. Abelin, Steven A. Carr
Publikováno v:
bioRxiv
Comprehensive, in-depth identification of the human leukocyte antigen HLA-I and HLA-II tumor immunopeptidome can inform the development of cancer immunotherapies. Mass spectrometry (MS) is powerful technology for direct identification of HLA peptides
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3f313274303cd151b25fcb6257107086
https://europepmc.org/articles/PMC10054976/
https://europepmc.org/articles/PMC10054976/
Autor:
Jin Zhou, Joshua M. Francis, Montse Sanchez-Cespedes, Xiaoyang Zhang, Matthew Meyerson, Steven A. Carr, Tanya Svinkina, Estrella Aguilera-Jimenez, Namrata D. Udeshi, Manuel Torres-Diz, Diana Cai, Paula Llabata, Yoichiro Mitsuishi, Zhong Wu, Peter S. Choi, Lior Golomb, Yanli Liu
Publikováno v:
Mol Cancer Res
Genomic analysis of lung adenocarcinomas has revealed that the MGA gene, which encodes a heterodimeric partner of the MYC-interacting protein MAX, is significantly mutated or deleted in lung adenocarcinomas. Most of the mutations are loss of function
Phosphorylation coexists withO-GlcNAcylation in a plant virus protein and influences viral infection
Autor:
Juan Antonio García, Sergio Ciordia, Marta Hervás, Sandra Martínez-Turiño, Donald F. Hunt, Namrata D. Udeshi, Jeffrey Shabanowitz, José de Jesús Pérez, Rosana Navajas
Publikováno v:
Molecular Plant Pathology. 19:1427-1443
Phosphorylation and O-GlcNAcylation are two widespread post-translational modifications (PTMs), often affecting the same eukaryotic target protein. Plum pox virus (PPV) is a member of the genus Potyvirus which infects a wide range of plant species. O
Autor:
Steven A. Carr, Moran Dvela-Levitt, Nicolas Wieder, Ozan Aygün, Anna Greka, Namrata D. Udeshi, Jonas Sieber, Mauricio Ostrosky-Frid
Publikováno v:
Journal of Biological Chemistry. 292:18878-18885
The up-regulation of chaperones such as the 78-kDa glucose-regulated protein (GRP78, also referred to as BiP or HSPA5) is part of the adaptive cellular response to endoplasmic reticulum (ER) stress. GRP78 is widely used as a marker of the unfolded pr
Autor:
Vamsi K. Mootha, Dominic Ryan, Karsten Krug, Steven A. Carr, Karl R. Clauser, Tslil Ast, Namrata D. Udeshi, Kayvon Pedram, Tanya Svinkina, Alice Y. Ting, Samuel A. Myers, Shaunt Fereshetian, Ozan Aygün
Publikováno v:
Nature Methods. 14:1167-1170
Although purification of biotinylated molecules is highly efficient, identifying specific sites of biotinylation remains challenging. We show that anti-biotin antibodies enable unprecedented enrichment of biotinylated peptides from complex peptide mi
Autor:
Mark H. Ellisman, Thomas J. Deerinck, Steven A. Carr, Shuo Han, Namrata D. Udeshi, Tanya Svinkina, Alice Y. Ting
Publikováno v:
Cell chemical biology, vol 24, iss 3
A recurring challenge in cell biology is to define themolecular components of macromolecular complexes of interest. The predominant method, immunoprecipitation, recovers only strong interaction partners that survive cell lysis and repeated detergent
Publikováno v:
The FASEB Journal. 32
Autor:
Jeannie T. Lee, Sally E. Peach, Jesse S. Boehm, Amanda L. Creech, Verena K. Maier, Jacob D. Jaffe, Caitlin M. Feeney, Namrata D. Udeshi, Jordan E. Taylor, Steven A. Carr, Xiaoyun Wu
Publikováno v:
Methods. 72:57-64
Epigenetic control of genome function is an important regulatory mechanism in diverse processes such as lineage commitment and environmental sensing, and in disease etiologies ranging from neuropsychiatric disorders to cancer. Here we report a robust
Autor:
Steven A. Carr, Vamsi K. Mootha, Tanya Svinkina, Alice Y. Ting, Hyun-Woo Rhee, Victoria Hung, Namrata D. Udeshi, Valentin Cracan, Peng Zou
Publikováno v:
PMC
Obtaining complete protein inventories for subcellular regions is a challenge that often limits our understanding of cellular function, especially for regions that are impossible to purify and are therefore inaccessible to traditional proteomic analy