Zobrazeno 1 - 5
of 5
pro vyhledávání: '"Kristín Rós Kjartansdóttir"'
Autor:
Zsolt Baranyai, Karen Dybkær, David Hebbelstrup Jensen, Imre Pete, Sarah Mollerup, Lasse Vinner, Ewa Rajpert-De Meyts, Kristín Rós Kjartansdóttir, Eske Willerslev, Thomas Arn Hansen, Stine Raith Richter, Robert Gniadecki, Carlotta Pietroni, Jacob Rosenberg, Alba Rey-Iglesia, David E. Alquezar-Planas, Pernille V. S. Olsen, Jill Levin Langhoff, Ildikó Vereczkey, Ida Broman Nielsen, Jose Alejandro Romero Herrera, Peter Hokland, Anders J. Hansen, Søren Brunak, Maria Asplund, Estrid Høgdall, Hans Erik Johnsen, Line Groth-Pedersen, Thomas Sicheritz-Pontén, Jose M. G. Izarzugaza, Ulrik Baandrup, Randi Holm Jensen, Torben Steiniche, Christian von Buchwald, Jens Friis-Nielsen, Helena Fridholm, Ole Lund, Tobias Mourier, Christopher Barnes, Lars Peter Nielsen
Publikováno v:
Mollerup, S, Asplund, M, Friis-Nielsen, J, Kjartansdóttir, K R, Fridholm, H, Hansen, T A, Herrera, J A R, Barnes, C J, Jensen, R H, Richter, S R, Nielsen, I B, Pietroni, C, Alquezar-Planas, D E, Rey-Iglesia, A, Olsen, P V S, De Meyts, E R, Groth-Pedersen, L, von Buchwald, C, Jensen, D H, Gniadecki, R, Høgdall, E, Langhoff, J L, Pete, I, Vereczkey, I, Baranyai, Z, Dybkaer, K, Johnsen, H E, Steiniche, T, Hokland, P, Rosenberg, J, Baandrup, U, Sicheritz-Pontén, T, Willerslev, E, Brunak, S, Lund, O, Mourier, T, Vinner, L, Izarzugaza, J M G, Nielsen, L P & Hansen, A J 2019, ' High-throughput sequencing-based investigation of viruses in human cancers by multi-enrichment approach ', The Journal of Infectious Diseases, vol. 220, no. 8, pp. 1312-1324 . https://doi.org/10.1093/infdis/jiz318
Mollerup, S, Asplund, M, Friis-Nielsen, J, Kjartansdóttir, K R, Fridholm, H, Hansen, T A, Herrera, J A R, Barnes, C J, Jensen, R H, Richter, S R, Nielsen, I B, Pietroni, C, Alquezar-Planas, D E, Rey-Iglesia, A, Olsen, P V S, Rajpert-De Meyts, E, Groth-Pedersen, L, von Buchwald, C, Jensen, D H, Gniadecki, R, Høgdall, E, Langhoff, J L, Pete, I, Vereczkey, I, Baranyai, Z, Dybkaer, K, Johnsen, H E, Steiniche, T, Hokland, P, Rosenberg, J, Baandrup, U, Sicheritz-Pontén, T, Willerslev, E, Brunak, S, Lund, O, Mourier, T, Vinner, L, Izarzugaza, J M G, Nielsen, L P & Hansen, A J 2019, ' High-Throughput Sequencing-Based Investigation of Viruses in Human Cancers by Multienrichment Approach ', The Journal of Infectious Diseases, vol. 220, no. 8, pp. 1312-1324 . https://doi.org/10.1093/infdis/jiz318
The Journal of Infectious Diseases
Mollerup, S, Asplund, M, Friis-Nielsen, J, Kjartansdóttir, K R, Fridholm, H, Hansen, T A, Herrera, J A R, Barnes, C J, Jensen, R H, Richter, S R, Nielsen, I B, Pietroni, C, Alquezar-Planas, D E, Rey-Iglesia, A, Olsen, P V S, Rajpert-De Meyts, E, Groth-Pedersen, L, von Buchwald, C, Jensen, D H, Gniadecki, R, Høgdall, E, Langhoff, J L, Pete, I, Vereczkey, I, Baranyai, Z, Dybkaer, K, Johnsen, H E, Steiniche, T, Hokland, P, Rosenberg, J, Baandrup, U, Sicheritz-Pontén, T, Willerslev, E, Brunak, S, Lund, O, Mourier, T, Vinner, L, Izarzugaza, J M G, Nielsen, L P & Hansen, A J 2019, ' High-throughput sequencing-based investigation of viruses in human cancers by multi-enrichment approach ', Journal of Infectious Diseases, vol. 220, no. 8, pp. 1312-1324 . https://doi.org/10.1093/infdis/jiz318
Mollerup, S, Asplund, M, Friis-Nielsen, J, Kjartansdóttir, K R, Fridholm, H, Hansen, T A, Herrera, J A R, Barnes, C J, Jensen, R H, Richter, S R, Nielsen, I B, Pietroni, C, Alquezar-Planas, D E, Rey-Iglesia, A, Olsen, P V S, Rajpert-De Meyts, E, Groth-Pedersen, L, von Buchwald, C, Jensen, D H, Gniadecki, R, Høgdall, E, Langhoff, J L, Pete, I, Vereczkey, I, Baranyai, Z, Dybkaer, K, Johnsen, H E, Steiniche, T, Hokland, P, Rosenberg, J, Baandrup, U, Sicheritz-Pontén, T, Willerslev, E, Brunak, S, Lund, O, Mourier, T, Vinner, L, Izarzugaza, J M G, Nielsen, L P & Hansen, A J 2019, ' High-Throughput Sequencing-Based Investigation of Viruses in Human Cancers by Multienrichment Approach ', The Journal of Infectious Diseases, vol. 220, no. 8, pp. 1312-1324 . https://doi.org/10.1093/infdis/jiz318
The Journal of Infectious Diseases
Mollerup, S, Asplund, M, Friis-Nielsen, J, Kjartansdóttir, K R, Fridholm, H, Hansen, T A, Herrera, J A R, Barnes, C J, Jensen, R H, Richter, S R, Nielsen, I B, Pietroni, C, Alquezar-Planas, D E, Rey-Iglesia, A, Olsen, P V S, Rajpert-De Meyts, E, Groth-Pedersen, L, von Buchwald, C, Jensen, D H, Gniadecki, R, Høgdall, E, Langhoff, J L, Pete, I, Vereczkey, I, Baranyai, Z, Dybkaer, K, Johnsen, H E, Steiniche, T, Hokland, P, Rosenberg, J, Baandrup, U, Sicheritz-Pontén, T, Willerslev, E, Brunak, S, Lund, O, Mourier, T, Vinner, L, Izarzugaza, J M G, Nielsen, L P & Hansen, A J 2019, ' High-throughput sequencing-based investigation of viruses in human cancers by multi-enrichment approach ', Journal of Infectious Diseases, vol. 220, no. 8, pp. 1312-1324 . https://doi.org/10.1093/infdis/jiz318
Background Viruses and other infectious agents cause more than 15% of human cancer cases. High-throughput sequencing-based studies of virus-cancer associations have mainly focused on cancer transcriptome data. Methods In this study, we applied a dive
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::389b6f096418f08500be47e5d37af82a
https://vbn.aau.dk/da/publications/a8b6be0c-34de-4fcf-b6ef-ab0d8ac39650
https://vbn.aau.dk/da/publications/a8b6be0c-34de-4fcf-b6ef-ab0d8ac39650
Autor:
David E. Alquezar-Planas, Thomas Sicheritz-Pontén, Stine Raith Richter, Helena Fridholm, Lars Peter Nielsen, Jose Alejandro Romero Herrera, Jens Friis-Nielsen, Sarah Mollerup, Alba Rey-Iglesia, Ole Lund, Maria Asplund, Søren Brunak, Jose M. G. Izarzugaza, Kristín Rós Kjartansdóttir, Ida Broman Nielsen, Pernille V. S. Olsen, Maria Luisa Matey-Hernandez, Tobias Mourier, Anders J. Hansen, Lasse Vinner, Eske Willerslev, Thomas Arn Hansen, Randi Holm Jensen
Publikováno v:
Asplund, M, Kjartansdóttir, K R, Mollerup, S, Vinner, L, Fridholm, H, Herrera, J A R, Friis-Nielsen, J, Hansen, T A, Jensen, R H, Nielsen, I B, Richter, S R, Rey-Iglesia, A, Matey-Hernandez, M L, Alquezar-Planas, D E, Olsen, P V S, Sicheritz-Pontén, T, Willerslev, E, Lund, O, Brunak, S, Mourier, T, Nielsen, L P, Izarzugaza, J M G & Hansen, A J 2019, ' Contaminating viral sequences in high-throughput sequencing viromics : a linkage study of 700 sequencing libraries ', Clinical Microbiology and Infection, vol. 25, no. 10, pp. 1277-1285 . https://doi.org/10.1016/j.cmi.2019.04.028
Asplund, M, Kjartansdóttir, K R, Mollerup, S, Vinner, L, Fridholm, H, Herrera, J A R, Friis-Nielsen, J, Hansen, T A, Jensen, R H, Nielsen, I B, Richter, S R, Rey-Iglesia, A, Matey-Hernandez, M L, Alquezar-Planas, D E, Olsen, P V S, Sicheritz-Pontén, T, Willerslev, E, Lund, O, Brunak, S, Mourier, T, Nielsen, L P, Izarzugaza, J M G & Hansen, A J 2019, ' Contaminating viral sequences in high-throughput sequencing viromics: a linkage study of 700 sequencing libraries ', Clinical Microbiology and Infection, vol. 25, no. 10, pp. 1277-1285 . https://doi.org/10.1016/j.cmi.2019.04.028
Asplund, M, Kjartansdóttir, K R, Mollerup, S, Vinner, L, Fridholm, H, Herrera, J A R, Friis-Nielsen, J, Hansen, T A, Jensen, R H, Nielsen, I B, Richter, S R, Rey-Iglesia, A, Matey-Hernandez, M L, Alquezar-Planas, D E, Olsen, P V S, Sicheritz-Pontén, T, Willerslev, E, Lund, O, Brunak, S, Mourier, T, Nielsen, L P, Izarzugaza, J M G & Hansen, A J 2019, ' Contaminating viral sequences in high-throughput sequencing viromics: a linkage study of 700 sequencing libraries ', Clinical Microbiology and Infection, vol. 25, no. 10, pp. 1277-1285 . https://doi.org/10.1016/j.cmi.2019.04.028
Objectives Sample preparation for high-throughput sequencing (HTS) includes treatment with various laboratory components, potentially carrying viral nucleic acids, the extent of which has not been thoroughly investigated. Our aim was to systematicall
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2dedc2a938c48e2658f687f847f4dcd6
https://curis.ku.dk/ws/files/229271333/1_s2.0_S1198743X1930206X_main.pdf
https://curis.ku.dk/ws/files/229271333/1_s2.0_S1198743X1930206X_main.pdf
Autor:
Eske Willerslev, Thomas Arn Hansen, Lasse Vinner, Kristín Rós Kjartansdóttir, Michael Bunce, Sarah Mollerup, Tandy Warnow, Lars Peter Nielsen, Megan L. Coghlan, Anders J. Hansen, Nicole White, Helena Fridholm, David E. Alquezar-Planas, Tobias Mourier, Randi Holm Jensen, Graham J. Belsham, Nam Nguyen, Tejal Joshi
Publikováno v:
Emerging Microbes & Infections
Arn Hansen, T, Mollerup, S, Nguyen, N-P, White, N E, Coghlan, M, Alquezar-Planas, D E, Joshi, T, Jensen, R H, Fridholm, H, Kjartansdóttir, K R, Mourier, T, Warnow, T, Belsham, G, Bunce, M, Willerslev, E, Nielsen, L P, Vinner, L & Hansen, A J 2016, ' High diversity of picornaviruses in rats from different continents revealed by deep sequencing ', Emerging Microbes & Infections, vol. 5, no. 8, e90 . https://doi.org/10.1038/emi.2016.90
Hansen, T A, Mollerup, S, Nam-phuong Nguyen, White, N E, Coghlan, M, Alquezar Planas, D E, Joshi, T, Jensen, R H, Fridholm, E M H, Kjartansdóttir, K R, Mourier, T, Warnow, T, Belsham, G J, Bunce, M, Willerslev, E, Nielsen, L P, Vinner, L & Hansen, A J 2016, ' High diversity of picornaviruses in rats from different continents revealed by deep sequencing ', Emerging Microbes & Infections, vol. 5, e90 . https://doi.org/10.1038/emi.2016.90
Arn Hansen, T, Mollerup, S, Nguyen, N-P, White, N E, Coghlan, M, Alquezar-Planas, D E, Joshi, T, Jensen, R H, Fridholm, H, Kjartansdóttir, K R, Mourier, T, Warnow, T, Belsham, G, Bunce, M, Willerslev, E, Nielsen, L P, Vinner, L & Hansen, A J 2016, ' High diversity of picornaviruses in rats from different continents revealed by deep sequencing ', Emerging Microbes & Infections, vol. 5, no. 8, e90 . https://doi.org/10.1038/emi.2016.90
Hansen, T A, Mollerup, S, Nam-phuong Nguyen, White, N E, Coghlan, M, Alquezar Planas, D E, Joshi, T, Jensen, R H, Fridholm, E M H, Kjartansdóttir, K R, Mourier, T, Warnow, T, Belsham, G J, Bunce, M, Willerslev, E, Nielsen, L P, Vinner, L & Hansen, A J 2016, ' High diversity of picornaviruses in rats from different continents revealed by deep sequencing ', Emerging Microbes & Infections, vol. 5, e90 . https://doi.org/10.1038/emi.2016.90
Outbreaks of zoonotic diseases in humans and livestock are not uncommon, and an important component in containment of such emerging viral diseases is rapid and reliable diagnostics. Such methods are often PCR-based and hence require the availability
Autor:
Søren Brunak, Tobias Mourier, Lasse Vinner, Helena Fridholm, Kristín Rós Kjartansdóttir, Jens Friis-Nielsen, Sarah Mollerup, Jose Alejandro Romero Herrera, Maria Asplund, Eske Willerslev, Lars Peter Nielsen, Torben Steiniche, Jose M. G. Izarzugaza, Anders J. Hansen
Publikováno v:
Mollerup, S, Fridholm, E M H, Vinner, L, Kjartansdóttir, K R, Friis-Nielsen, J, Asplund, M, Romero, J A H, Steiniche, T, Mourier, T, Brunak, S, Willerslev, E, Izarzugaza, J M G, Hansen, A J & Nielsen, L P 2017, ' Cutavirus in cutaneous malignant melanoma ', Emerging Infectious Diseases, vol. 23, no. 2, pp. 363-365 . https://doi.org/10.3201/eid2302.161564
Emerging Infectious Diseases
Mollerup, S, Fridholm, H, Vinner, L, Kjartansdóttir, K R, Friis-Nielsen, J, Asplund, M, Herrera, J A R, Steiniche, T, Mourier, T, Brunak, S, Willerslev, E, Izarzugaza, J M G, Hansen, A J & Nielsen, L P 2017, ' Cutavirus in Cutaneous Malignant Melanoma ', Emerging Infectious Diseases (Print Edition), vol. 23, no. 2, pp. 363-365 . https://doi.org/10.3201/eid2302.161564
Emerging Infectious Diseases, Vol 23, Iss 2, Pp 363-365 (2017)
Mollerup, S, Fridholm, H, Vinner, L, Kjartansdóttir, K R, Friis-Nielsen, J, Asplund, M, Herrera, J A R, Steiniche, T, Mourier, T, Brunak, S, Willerslev, E, Izarzugaza, J M G, Hansen, A J & Nielsen, L P 2017, ' Cutavirus in cutaneous malignant melanoma ', Emerging Infectious Diseases, vol. 23, no. 2, pp. 363-365 . https://doi.org/10.3201/eid2302.161564
Mollerup, S, Fridholm, H, Vinner, L, Kjartansdóttir, K R, Friis-Nielsen, J, Asplund, M, Herrera, J R, Steiniche, T, Mourier, T, Brunak, S, Willerslev, E, Gonzalez-Izarzugaza, J M, Hansen, A J & Nielsen, L P 2017, ' Cutavirus in Cutaneous Malignant Melanoma ', Emerging Infectious Diseases, vol. 23, no. 2, pp. 363-365 . https://doi.org/10.3201/eid2302.161564
Emerging Infectious Diseases
Mollerup, S, Fridholm, H, Vinner, L, Kjartansdóttir, K R, Friis-Nielsen, J, Asplund, M, Herrera, J A R, Steiniche, T, Mourier, T, Brunak, S, Willerslev, E, Izarzugaza, J M G, Hansen, A J & Nielsen, L P 2017, ' Cutavirus in Cutaneous Malignant Melanoma ', Emerging Infectious Diseases (Print Edition), vol. 23, no. 2, pp. 363-365 . https://doi.org/10.3201/eid2302.161564
Emerging Infectious Diseases, Vol 23, Iss 2, Pp 363-365 (2017)
Mollerup, S, Fridholm, H, Vinner, L, Kjartansdóttir, K R, Friis-Nielsen, J, Asplund, M, Herrera, J A R, Steiniche, T, Mourier, T, Brunak, S, Willerslev, E, Izarzugaza, J M G, Hansen, A J & Nielsen, L P 2017, ' Cutavirus in cutaneous malignant melanoma ', Emerging Infectious Diseases, vol. 23, no. 2, pp. 363-365 . https://doi.org/10.3201/eid2302.161564
Mollerup, S, Fridholm, H, Vinner, L, Kjartansdóttir, K R, Friis-Nielsen, J, Asplund, M, Herrera, J R, Steiniche, T, Mourier, T, Brunak, S, Willerslev, E, Gonzalez-Izarzugaza, J M, Hansen, A J & Nielsen, L P 2017, ' Cutavirus in Cutaneous Malignant Melanoma ', Emerging Infectious Diseases, vol. 23, no. 2, pp. 363-365 . https://doi.org/10.3201/eid2302.161564
A novel human protoparvovirus related to human bufavirus and preliminarily named cutavirus has been discovered. We detected cutavirus in a sample of cutaneous malignant melanoma by using viral enrichment and high-throughput sequencing. The role of cu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::98a7de43ea947add369f09207455dc6b
https://curis.ku.dk/ws/files/179918393/Mollerup_2017_Cutavirus_in_cutaneous.pdf
https://curis.ku.dk/ws/files/179918393/Mollerup_2017_Cutavirus_in_cutaneous.pdf
Autor:
Helena Fridholm, Sarah Mollerup, Jens Friis-Nielsen, Pernille V. S. Olsen, Tobias Mourier, Stine Raith Richter, Eske Willerslev, David E. Alquezar-Planas, Maria Asplund, Thomas Sicheritz-Pontén, Thomas Arn Hansen, Ole Lund, Lars Peter Nielsen, Søren Brunak, Lasse Vinner, Jose M. G. Izarzugaza, Kristín Rós Kjartansdóttir, Randi Holm Jensen, Anders J. Hansen, Alba Rey-Iglesia, Ida Broman Nielsen
Publikováno v:
Friis-Nielsen, J, Kjartansdóttir, K R, Mollerup, S, Asplund, M, Mourier, T, Holm Jensen, R, Arn Hansen, T, Rey-Iglesia, A, Vinner, L, Fridholm, H, Nielsen, L P, Willerslev, E, Sicheritz-Pontén, T, Lund, O, Hansen, A J, Gonzalez-Izarzugaza, J M & Brunak, S 2016, ' Identification of Known and Novel Recurrent Viral Sequences in Data from Multiple Patients and Multiple Cancers ', Viruses, vol. 8, no. 53 . https://doi.org/10.3390/v8020053
Viruses
Viruses, Vol 8, Iss 2, p 53 (2016)
Friis-Nielsen, J, Kjartansdóttir, K R, Mollerup, S, Asplund, M, Mourier, T, Jensen, R H, Hansen, T A, Rey de la Iglesia, A, Richter, S R, Nielsen, I B, Alquezar Planas, D E, Olsen, P V S, Vinner, L, Fridholm, E M H, Nielsen, L P, Willerslev, E, Sicheritz-Pontén, T, Lund, O, Hansen, A J, Izarzugaza, J M G & Brunak, S 2016, ' Identification of known and novel recurrent viral sequences in data from multiple patients and multiple cancers ', Viruses, vol. 8, no. 2, 53 . https://doi.org/10.3390/v8020053
Viruses; Volume 8; Issue 2; Pages: 53
Viruses
Viruses, Vol 8, Iss 2, p 53 (2016)
Friis-Nielsen, J, Kjartansdóttir, K R, Mollerup, S, Asplund, M, Mourier, T, Jensen, R H, Hansen, T A, Rey de la Iglesia, A, Richter, S R, Nielsen, I B, Alquezar Planas, D E, Olsen, P V S, Vinner, L, Fridholm, E M H, Nielsen, L P, Willerslev, E, Sicheritz-Pontén, T, Lund, O, Hansen, A J, Izarzugaza, J M G & Brunak, S 2016, ' Identification of known and novel recurrent viral sequences in data from multiple patients and multiple cancers ', Viruses, vol. 8, no. 2, 53 . https://doi.org/10.3390/v8020053
Viruses; Volume 8; Issue 2; Pages: 53
Virus discovery from high throughput sequencing data often follows a bottom-up approach where taxonomic annotation takes place prior to association to disease. Albeit effective in some cases, the approach fails to detect novel pathogens and remote va
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::152cd08bd17178bebcfa49e2e6bffa94
https://orbit.dtu.dk/en/publications/3cbea22f-79fd-4730-9b74-27f1ffad8431
https://orbit.dtu.dk/en/publications/3cbea22f-79fd-4730-9b74-27f1ffad8431