Zobrazeno 1 - 6
of 6
pro vyhledávání: '"Emily L. Clark"'
Autor:
Mazdak Salavati, Shernae A Woolley, Yennifer Cortés Araya, Michelle M Halstead, Claire Stenhouse, Martin Johnsson, Cheryl J Ashworth, Alan L Archibald, Francesc X Donadeu, Musa A Hassan, Emily L Clark
Publikováno v:
Salavati, M, Woolley, S, Cortés Araya, Y, Halstead, M, Stenhouse, C, Johnsson, M, Ashworth, C, Archibald, A, Donadeu, X, Hassan, M & Clark, E 2021, ' Profiling of open chromatin in developing pig (Sus scrofa) muscle to identify regulatory regions ', G3: Genes | Genomes | Genetics . https://doi.org/10.1093/g3journal/jkab424
There is very little information about how the genome is regulated in domestic pigs (Sus scrofa). This lack of knowledge hinders efforts to define and predict the effects of genetic variants in pig breeding programs. To address this knowledge gap, we
Autor:
Mazdak Salavati, Alex Caulton, Richard Clark, Iveta Gazova, Timothy P. L. Smith, Kim C. Worley, Noelle E. Cockett, Alan L. Archibald, Shannon M. Clarke, Brenda M. Murdoch, Emily L. Clark
Publikováno v:
Frontiers in Genetics, Vol 11 (2020)
Salavati, M, Caulton, A, Clark, R, Gazova, I, Smith, T P L, Worley, K C, Cockett, N E, Archibald, A, Clarke, S M, Murdoch, B & Clark, E 2020, ' Global analysis of transcription start sites in the new ovine reference genome (Oar rambouillet v1.0) ', Frontiers in genetics . https://doi.org/10.3389/fgene.2020.580580
Salavati, M, Caulton, A, Clark, R, Gazova, I, Smith, T P L, Worley, K C, Cockett, N E, Archibald, A, Clarke, S M, Murdoch, B & Clark, E 2020, ' Global analysis of transcription start sites in the new ovine reference genome (Oar rambouillet v1.0) ', Frontiers in genetics . https://doi.org/10.3389/fgene.2020.580580
The overall aim of the Ovine FAANG project is to provide a comprehensive annotation of the new highly contiguous sheep reference genome sequence (Oar rambouillet v1.0). Mapping of transcription start sites (TSS) is a key first step in understanding t
Autor:
Vicky E MacRae, David A. Hume, Greg R. Markby, Kim M. Summers, Brendan Corcoran, Stephen J. Bush, Emily L. Clark, Hiu-Gwen Tsang
Publikováno v:
Frontiers in Genetics, Vol 11 (2020)
Tsang, G, Clark, E, Markby, G, Bush, S, Hume, D, Corcoran, B, MacRae, V & Summers, K 2020, ' Expression of calcification and extracellular matrix genes in the cardiovascular system of the healthy domestic sheep (Ovis aries). ', Frontiers in genetics, vol. 11 . https://doi.org/10.3389/fgene.2020.00919
Frontiers in Genetics
Tsang, G, Clark, E, Markby, G, Bush, S, Hume, D, Corcoran, B, MacRae, V & Summers, K 2020, ' Expression of calcification and extracellular matrix genes in the cardiovascular system of the healthy domestic sheep (Ovis aries). ', Frontiers in genetics, vol. 11 . https://doi.org/10.3389/fgene.2020.00919
Frontiers in Genetics
The maintenance of a healthy cardiovascular system requires expression of genes that contribute to essential biological activities and repression of those that are associated with functions likely to be detrimental to cardiovascular homeostasis. Vasc
Autor:
Richard Talbot, Andrew I. Su, David A. Hume, Chunlei Wu, Emily L. Clark, Kim M. Summers, Lindsey A. Waddell, Alan Archibald, Charity Muriuki, Heather Finlayson, Stephen J. Bush, Lel Eory
Publikováno v:
Summers, K, Bush, S, Wu, C, Su, A, Muriuki, C, Clark, E, Finlayson, H, Eory, L, Waddell, L, Talbot, R, Archibald, A & Hume, D 2020, ' Functional annotation of the transcriptome of the pig, Sus scrofa, based upon network analysis of an RNAseq transcriptional atlas ', Frontiers in genetics . https://doi.org/10.3389/fgene.2019.01355
Frontiers in Genetics
Frontiers in Genetics, Vol 10 (2020)
Frontiers in Genetics
Frontiers in Genetics, Vol 10 (2020)
The domestic pig (Sus scrofa) is both an economically-important livestock species and a model for biomedical research. Two highly-contiguous pig reference genomes have recently been released. To support functional annotation of the pig genomes andcom
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0f8c3283f7dd4e6854ca4a637e1f1507
https://hdl.handle.net/20.500.11820/621119c4-b553-4eaa-8966-15ef85bde23f
https://hdl.handle.net/20.500.11820/621119c4-b553-4eaa-8966-15ef85bde23f
Autor:
Charity Muriuki, Stephen J. Bush, Mazdak Salavati, Mary E.B. McCulloch, Zofia M. Lisowski, Morris Agaba, Appolinaire Djikeng, David A. Hume, Emily L. Clark
Publikováno v:
Frontiers in Genetics, Vol 10 (2019)
Muriuki, C, Bush, S, Salavati, M, Mcculloch, M, Lisowski, Z, Agaba, M, Djikeng, A, Hume, D A & Clark, E 2019, ' A mini-atlas of gene expression for the domestic goat (Capra hircus) ', Frontiers in genetics, vol. 10, 1080 . https://doi.org/10.3389/fgene.2019.01080
Muriuki, C, Bush, S, Salavati, M, Mcculloch, M, Lisowski, Z, Agaba, M, Djikeng, A, Hume, D A & Clark, E 2019, ' A mini-atlas of gene expression for the domestic goat (Capra hircus) ', Frontiers in genetics, vol. 10, 1080 . https://doi.org/10.3389/fgene.2019.01080
Goats (Capra hircus) are an economically important livestock species providing meat and milk across the globe. They are of particular importance in tropical agri-systems contributing to sustainable agriculture, alleviation of poverty, social cohesion
Autor:
Emily L. Clark, Stephen J. Bush, David A. Hume, Mary E. B. McCulloch, Mazdak Salavati, Sergio E. Palma-Vera
Publikováno v:
Frontiers in Genetics, Vol 10 (2019)
Frontiers in Genetics
Salavati, M, Bush, S, Palma-Vera, S, McCulloch, M, Hume, D & Clark, E 2019, ' Elimination of reference mapping bias reveals robust immune related allele-specific expression in cross-bred sheep ', Frontiers in genetics . https://doi.org/10.3389/fgene.2019.00863
Salavati, M, Bush, S, Palma-Vera, S, McCulloch, M, Hume, D A & Clark, E 2019, ' Elimination of reference mapping bias reveals robust immune related allele-specific expression in crossbred sheep ' . https://doi.org/10.3389/fgene.2019.00863
Salavati, M, Bush, S, Palma-Vera, S, McCulloch, M, Hume, D & Clark, E 2019 ' Elimination of reference mapping bias reveals robust immune related allele-specific expression in cross-bred sheep ' bioRxiv . https://doi.org/10.1101/619122
Frontiers in Genetics
Salavati, M, Bush, S, Palma-Vera, S, McCulloch, M, Hume, D & Clark, E 2019, ' Elimination of reference mapping bias reveals robust immune related allele-specific expression in cross-bred sheep ', Frontiers in genetics . https://doi.org/10.3389/fgene.2019.00863
Salavati, M, Bush, S, Palma-Vera, S, McCulloch, M, Hume, D A & Clark, E 2019, ' Elimination of reference mapping bias reveals robust immune related allele-specific expression in crossbred sheep ' . https://doi.org/10.3389/fgene.2019.00863
Salavati, M, Bush, S, Palma-Vera, S, McCulloch, M, Hume, D & Clark, E 2019 ' Elimination of reference mapping bias reveals robust immune related allele-specific expression in cross-bred sheep ' bioRxiv . https://doi.org/10.1101/619122
Pervasive allelic variation at both gene and single nucleotide level (SNV) between individuals is commonly associated with complex traits in humans and animals. Allele-specific expression (ASE) analysis, using RNA-Seq, can provide a detailed annotati