Zobrazeno 1 - 5
of 5
pro vyhledávání: '"Agnieszka Mykowiecka"'
Publikováno v:
Algorithms for Molecular Biology, Vol 19, Iss 1, Pp 1-20 (2024)
Abstract We present a novel problem, called MetaEC, which aims to infer gene-species assignments in a collection of partially leaf-labeled gene trees labels by minimizing the size of duplication episode clustering (EC). This problem is particularly r
Externí odkaz:
https://doaj.org/article/922f8957c5a64170bb34a2be69ef8247
Publikováno v:
Algorithms for Molecular Biology, Vol 17, Iss 1, Pp 1-23 (2022)
Abstract Background Phylogenetic networks are mathematical models of evolutionary processes involving reticulate events such as hybridization, recombination, or horizontal gene transfer. One of the crucial notions in phylogenetic network modelling is
Externí odkaz:
https://doaj.org/article/88846ebb3626459aabf1dcf6c788d238
Autor:
Paweł Górecki, Agnieszka Mykowiecka
Publikováno v:
IEEE/ACM Transactions on Computational Biology and Bioinformatics. 16:713-726
Based on the classical non-parametric bootstrapping for phylogenetic trees, we propose a novel bootstrap method to define support for gene duplication and speciation events. By comparing bootstrap gene trees to the original gene tree, we calculate su
Publikováno v:
IEEE/ACM transactions on computational biology and bioinformatics. 15(5)
Background: Microbial communities from environmental samples show great diversity as bacteria quickly responds to changes in their ecosystems. To assess the scenario of the actual changes, metagenomics experiments aimed at sequencing genomic DNA from
Publikováno v:
PLoS ONE
PLoS ONE, Vol 8, Iss 1, p e54471 (2013)
PLoS ONE, Vol 8, Iss 1, p e54471 (2013)
The minimal set of proteins necessary to maintain a vertebrate cell forms an interesting core of cellular machinery. The known proteome of human red blood cell consists of about 1400 proteins. We treated this protein complement of one of the simplest