Zobrazeno 1 - 10
of 13
pro vyhledávání: '"Dawen Cai"'
Autor:
Margaret M. Harrington, Dawen Cai, Edward S. Boyden, Logan A. Walker, Hon Pong Jimmy Cheng, Fred Y. Shen
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-12 (2020)
Nature Communications
Nature Communications
Mapping neuroanatomy is a foundational goal towards understanding brain function. Electron microscopy (EM) has been the gold standard for connectivity analysis because nanoscale resolution is necessary to unambiguously resolve synapses. However, mole
Autor:
Ye Li, Logan A. Walker, Yimeng Zhao, Erica M. Edwards, Nigel S. Michki, Hon Pong Jimmy Cheng, Marya Ghazzi, Tiffany Y. Chen, Maggie Chen, Douglas H. Roossien, Dawen Cai
Publikováno v:
Frontiers in Neural Circuits
Frontiers in Neural Circuits, Vol 15 (2021)
Frontiers in Neural Circuits, Vol 15 (2021)
Identifying the cellular origins and mapping the dendritic and axonal arbors of neurons have been century old quests to understand the heterogeneity among these brain cells. Current Brainbow based transgenic animals take the advantage of multispectra
The study of neuron morphology requires robust and comprehensive methods to quantify the differences between neurons of different subtypes and animal species. Several software packages have been developed for the analysis of neuron tracing results st
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2c8870300e1f5a4da802956d0ea0eb08
https://doi.org/10.1101/2021.05.13.443832
https://doi.org/10.1101/2021.05.13.443832
Publikováno v:
ISBI
Reconstructing neuron morphology is central to uncovering the complexity of the nervous system. That is because the morphology of a neuron essentially provides the physical constraints to its intrinsic electrophysiological properties and its connecti
Publikováno v:
Opt Express
Laser scanning plays an important role in a broad range of applications. Toward 3D aberration-free scanning, a remote focusing technique has been developed for high-speed imaging applications. However, the implementation of remote focusing often suff
Autor:
Nigel S. Michki, Dawen Cai, Tiffany Y. Chen, Erica M. Edwards, Yimeng Zhao, Logan A. Walker, Marya Ghazzi, Douglas H. Roossien, Maggie Chen, Ye Li, Hon Pong Jimmy Cheng
Identifying the cellular origins and mapping the dendritic and axonal arbors of neurons have been century old quests to understand the heterogeneity among these brain cells. Classical chemical and genetic methods take advantage of light microscopy an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8f0d5a61d06cbdd17d00c355ce750371
Publikováno v:
J Neurosci Methods
BackgroundThe ability to reconstruct neuronal networks, local microcircuits, or the entire connectome is a central goal of modern neuroscience. Recently, advancements in sample preparation (e.g., sample expansion and Brainbow labeling) and optical (e
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5c0d98b788466739c3af8f1efffd7937
https://doi.org/10.1101/703900
https://doi.org/10.1101/703900
Autor:
John M Webb, Tingxin Xiao, Yan Yan, Madeleine Vandenbrink, Lia Y Min, Benjamin V Sadis, Fred Y. Shen, Johanna S Stecher, Aslan S. Dizaji, Robert S Huth, Takao K. Hensch, Jeff W. Lichtman, Luke J Bogart, Erik D. Herzog, Douglas H. Roossien, Sriakhila Akula, Dawen Cai, Cristina Mazuski, Ye Li
Publikováno v:
Bioinformatics
Summary This note describes nTracer, an ImageJ plug-in for user-guided, semi-automated tracing of multispectral fluorescent tissue samples. This approach allows for rapid and accurate reconstruction of whole cell morphology of large neuronal populati
Neuronal morphology reconstruction in fluorescence microscopy 3D images is essential for analyzing neuronal cell type and connectivity. Manual tracing of neurons in these images is time consuming and subjective. Automated tracing is highly desired ye
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::366cf930e84f81ade27c456434411d33
Autor:
Douglas H. Roossien, John M. Webb, Benjamin V. Sadis, Yan Yan, Lia Y. Min, Aslan S. Dizaji, Luke J. Bogart, Cristina Mazuski, Robert S. Huth, Johanna S. Stecher, Sriakhila Akula, Jeff W. Lichtman, Takao K. Hensch, Erik D. Herzog, Dawen Cai
Accurate and complete neuronal wiring diagrams are necessary for understanding brain function at many scales from long-range interregional projections to microcircuits. Traditionally, light microscopy-based anatomical reconstructions use monochromati
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4c936223a77b8f3f33f514c88afc05f1
https://doi.org/10.1101/230458
https://doi.org/10.1101/230458