Zobrazeno 1 - 7
of 7
pro vyhledávání: '"Lewis Y. Geer"'
Autor:
Stephen H. Bryant, Dachuan Zhang, Yanli Wang, Philippe Youkharibache, Renata C. Geer, Christopher J. Lanczycki, Gabriele H. Marchler, Lewis Y. Geer, Jiyao Wang, Lon Phan, Shennan Lu, Thomas Madej, Minghong Ward, Aron Marchler-Bauer
SummaryiCn3D (I-see-in-3D) is a web-based 3D molecular structure viewer focusing on the interactive structural analysis. It can simultaneously show 3D structure, 2D molecular contacts, and 1D protein and nucleotide sequences through an integrated seq
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f4e83e8d76416eff56cc2e4bf864aab7
https://doi.org/10.1101/501692
https://doi.org/10.1101/501692
Autor:
Joshua J. Coon, Neil G. Rumachik, Graeme C. McAlister, Michael S. Westphall, David J. Pagliarini, Jason D. Russell, Alexander S. Hebert, John E. P. Syka, Lewis Y. Geer
Publikováno v:
Analytical Chemistry. 84:2875-2882
We describe the first implementation of negative electron-transfer dissociation (NETD) on a hybrid ion trap-orbitrap mass spectrometer and its application to high-throughput sequencing of peptide anions. NETD, coupled with high pH separations, negati
Publikováno v:
International Journal of Mass Spectrometry. 259:197-203
Direct analysis of intact proteins on a chromatographic time scale is demonstrated on a modified linear ion trap mass spectrometer using sequential ion/ion reactions, electron transfer and proton transfer, to dissociate the sample and to convert the
Autor:
J. R. Cummings, C. J. Waddington, W. R. Binns, B. S. Nilsen, T. L. Garrard, J. Klarmann, Lewis Y. Geer
Publikováno v:
Advances in Space Research. 15:39-48
Any study of the origin of the UH nuclei in the cosmic rays requires that their observed abundances be propagated back to the source. This demands a knowledge of the interaction cross sections in the materials of the detectors, any local overlying ma
Autor:
Viswanadham Sridhara, Stephen H. Bryant, An Chi, Dina L. Bai, Jeffrey Shabanowitz, Donald F. Hunt, Lewis Y. Geer
Publikováno v:
Proteome Science
Proteome Science, Vol 10, Iss 1, p 8 (2012)
Proteome Science, Vol 10, Iss 1, p 8 (2012)
Background Electron Transfer Dissociation [ETD] can dissociate multiply charged precursor polypeptides, providing extensive peptide backbone cleavage. ETD spectra contain charge reduced precursor peaks, usually of high intensity, and whose pattern is
Autor:
Dina L. Bai, Donald F. Hunt, Daniel J. Burke, Joshua J. Coon, Lewis Y. Geer, Olga G. Troyanskaya, John E. P. Syka, An Chi, Jeffrey Shabanowitz, Curtis Huttenhower
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America. 104(7)
We present a strategy for the analysis of the yeast phosphoproteome that uses endo-Lys C as the proteolytic enzyme, immobilized metal affinity chromatography for phosphopeptide enrichment, a 90-min nanoflow-HPLC/electrospray-ionization MS/MS experime
Autor:
Lewis Y. Geer, Ming Xu, Stephen H. Bryant, Sanford P. Markey, Lukas Wagner, Dawn M. Maynard, Wenyao Shi, Jeffrey A. Kowalak, Xiaoyu Yang
Large numbers of MS/MS peptide spectra generated in proteomics experiments require efficient, sensitive and specific algorithms for peptide identification. In the Open Mass Spectrometry Search Algorithm (OMSSA), specificity is calculated by a classic
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eb841a42949c0f22e171c5eb708d7bac
http://arxiv.org/abs/q-bio/0406002
http://arxiv.org/abs/q-bio/0406002