Zobrazeno 1 - 10
of 34
pro vyhledávání: '"Taku Oshima"'
Autor:
Junya Yamamoto, Onuma Chumsakul, Yoshihiro Toya, Takuya Morimoto, Shenghao Liu, Kenta Masuda, Yasushi Kageyama, Takashi Hirasawa, Fumio Matsuda, Naotake Ogasawara, Hiroshi Shimizu, Ken-ichi Yoshida, Taku Oshima, Shu Ishikawa
Publikováno v:
DNA Research. 29
Partial bacterial genome reduction by genome engineering can improve the productivity of various metabolites, possibly via deletion of non-essential genome regions involved in undesirable metabolic pathways competing with pathways for the desired end
Autor:
Mamoru Yamada, Ryunosuke Muro, Hirotada Mori, Taku Oshima, Natsuko Ota, Tomoyuki Kosaka, Ayumi Osawa, Barry L. Wanner, Keiko Nakamura, Masayuki Murata, Kazuya Fujiyama
Publikováno v:
International Journal of Molecular Sciences, Vol 22, Iss 4535, p 4535 (2021)
International Journal of Molecular Sciences
Volume 22
Issue 9
International Journal of Molecular Sciences
Volume 22
Issue 9
The SOS response is induced upon DNA damage and the inhibition of Z ring formation by the product of the sulA gene, which is one of the LexA-regulated genes, allows time for repair of damaged DNA. On the other hand, severely DNA-damaged cells are eli
Autor:
Hiroyuki Tanaka, Kazuyuki Fujimitsu, Taku Oshima, Tsutomu Katayama, Yukie Inoue, Kazutoshi Kasho
Publikováno v:
Genes to Cells. 21:1015-1023
In Escherichia coli, the initiator protein ATP-DnaA promotes initiation of chromosome replication in a timely manner. After initiation, DnaA-bound ATP is hydrolyzed to yield ADP-DnaA, which is inactive in initiation. DnaA-reactivating sequences (DARS
Publikováno v:
Nucleic Acids Research
In Escherichia coli, the ATP-bound form of DnaA (ATP–DnaA) promotes replication initiation. During replication, the bound ATP is hydrolyzed to ADP to yield the ADP-bound form (ADP–DnaA), which is inactive for initiation. The chromosomal site DARS
Autor:
Akinori, Kato, Shuhei, Ueda, Taku, Oshima, Yoichi, Inukai, Toshihide, Okajima, Masayuki, Igarashi, Yoko, Eguchi, Ryutaro, Utsumi
Publikováno v:
The Journal of general and applied microbiology. 63(4)
The WalK/WalR two-component system is essential for cell wall metabolism and thus for cell growth in Bacillus subtilis. Waldiomycin was previously isolated as an antibiotic that targeted WalK, the cognate histidine kinase (HK) of the response regulat
Autor:
Divya P. Anantsri, Kensuke Nakamura, Shu Ishikawa, Taku Oshima, Onuma Chumsakul, Tai Quirke, Michiko M. Nakano
Publikováno v:
Journal of Bacteriology. 199
Upon oxygen limitation, the Bacillus subtilis ResE sensor kinase and its cognate ResD response regulator play primary roles in the transcriptional activation of genes functioning in anaerobic respiration. The nitric oxide (NO)-sensitive NsrR represso
Publikováno v:
Journal of Bacteriology. 195:1697-1705
Biofilm is a complex aggregate of cells that adhere to each other and produce an extracellular matrix. In Bacillus subtilis , an extracellular polysaccharide (EPS) and amyloid fiber (TasA), synthesized by the epsA - epsO and tapA - sipW - tasA operon
Autor:
Jon L. Hobman, Shu Ishikawa, Kensuke Nakamura, Taku Oshima, Onuma Chumsakul, Naotake Ogasawara, Tetsuya Kurata, Tomoaki Sakamoto
Publikováno v:
DNA Research: An International Journal for Rapid Publication of Reports on Genes and Genomes
Accurate identification of the DNA-binding sites of transcription factors and other DNA-binding proteins on the genome is crucial to understanding their molecular interactions with DNA. Here, we describe a new method: Genome Footprinting by high-thro
Publikováno v:
Nucleic Acids Research
Bacterial chromosome replication is initiated by binding of DnaA to a DnaA-box cluster (DBC) within the replication origin (oriC). In Bacillus subtilis, six additional DBCs are found outside of oriC and some are known to be involved in transcriptiona
Autor:
Taku Oshima, Hiroki Takahashi, Naotake Ogasawara, Takahiro Hishimoto, Shigehiko Kanaya, Onuma Chumsakul, Shu Ishikawa
Publikováno v:
Nucleic Acids Research
AbrB is a global transcriptional regulator of Bacillus subtilis that represses the expression of many genes during exponential growth. Here, we demonstrate that AbrB and its homolog Abh bind to hundreds of sites throughout the entire B. subtilis geno