Zobrazeno 1 - 9
of 9
pro vyhledávání: '"Xue-Song Zhang"'
Discovering multiple types of DNA methylation from bacteria and microbiome using nanopore sequencing
Publikováno v:
Nature methods
Bacterial DNA methylation occurs at diverse sequence contexts and plays important functional roles in cellular defense and gene regulation. Existing methods for detecting DNA modification from nanopore sequencing data do not effectively support de no
Autor:
Joseph C. Devlin, Stanley L. Hazen, Linchen He, Meifan Zhang, Michelle H. Badri, John Alex Chalk, Wei Vivian Li, Mark Brown, Richard Bonneau, Jincheng Wang, Jamie Morton, Thomas Battaglia, Kelly Needles, Kelly V. Ruggles, Jackie Li, Xue-Song Zhang, Maria Gloria Dominguez-Bello, Martin J. Blaser, Christopher M. Strauch, Yue Sandra Yin, Ina Nemet, Fredrik Bäckhed, Zeneng Wang, Kimberly A. Krautkramer, Nicole J. Altomare, Huilin Li, Julia Mount, Abigail J. S. Armstrong, Viviane Liao
Publikováno v:
Cell host & microbe, vol 29, iss 8
Cell Host Microbe
Cell Host Microbe
Early-life antibiotic exposure perturbs the intestinal microbiota and accelerates type 1 diabetes (T1D) development in the NOD mouse model. Here, we found that maternal cecal microbiota transfer (CMT) to NOD mice after early-life antibiotic perturbat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2e9b81061efc88f7ea1619254f9ae321
https://escholarship.org/uc/item/2795h73k
https://escholarship.org/uc/item/2795h73k
Publikováno v:
Biochim Biophys Acta Biomembr
Ordered lipid domains (rafts) are generally considered to be features of eukaryotic cells, but ordered lipid domains formed by cholesterol lipids have been identified in bacteria from the genus Borrelia, and similar cholesterol lipids exist in the ba
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7cf9b33b4c445c45079732c55dfaeb3b
https://europepmc.org/articles/PMC6814566/
https://europepmc.org/articles/PMC6814566/
Publikováno v:
Scientific Reports
Scientific Reports, Vol 9, Iss 1, Pp 1-12 (2019)
Scientific Reports, Vol 9, Iss 1, Pp 1-12 (2019)
The production of American ginseng (Panax quinquefolius L.) is severely limited by the replant disorders in China. Crop rotation with maize might reduce the replant problems, but little information is available on the effect of maize rotation on soil
Helicobacter pylori sabA gene is associated with iron deficiency anemia in childhood and adolescence
Publikováno v:
PLoS ONE
PLoS ONE, Vol 12, Iss 8, p e0184046 (2017)
PLoS ONE, Vol 12, Iss 8, p e0184046 (2017)
Background Gastric Helicobacter pylori colonization leads to iron deficiency anemia (IDA), especially in children and adolescents. However the pathogenesis is poorly understood. Objective We sought to identify specific H. pylori genes involved in IDA
Autor:
Xue-Song Zhang, Shijia Zhu, Gintaras Deikus, Gang Fang, Jeremiah J. Faith, Austin G. Davis-Richardson, John Beaulaurier, Ronald Canepa, Robert Sebra, Eric W. Triplett, Ilaria Mogno, Eric E. Schadt
Publikováno v:
Nature biotechnology
Shotgun metagenomics methods enable characterization of microbial communities in human microbiome and environmental samples. Assembly of metagenome sequences does not output whole genomes, so computational binning methods have been developed to clust
Publikováno v:
Journal of bacteriology. 191(4)
The roles of toxin-antitoxin (TA) systems in bacteria have been debated. Here, the role of five TA systems in regard to biofilm development was investigated (listed as toxin/antitoxin: MazF/MazE, RelE/RelB, ChpB, YoeB/YefM, and YafQ/DinJ). Although t
Autor:
Hai-Ping Cheng, Xue-Song Zhang
Publikováno v:
Applied and environmental microbiology. 72(4)
The soil bacterium Sinorhizobium meliloti establishes nitrogen-fixing symbiosis with its leguminous host plant, alfalfa, following a series of continuous signal exchanges. The complexity of the changes of alfalfa root structures during symbiosis and
Autor:
Younghoon Kim1, Xiaoxue Wang1, Qun Ma1, Xue-Song Zhang1, Wood, Thomas K.1,2,3 Thomas.Wood@chemail.tamu.edu
Publikováno v:
Journal of Bacteriology. Feb2009, Vol. 191 Issue 4, p1257-1267. 10p.