Zobrazeno 1 - 10
of 35
pro vyhledávání: '"Colomban de Vargas"'
Autor:
Zoé Mériguet, Anna Oddone, David Le Guen, Thibaut Pollina, Romain Bazile, Clémentine Moulin, Romain Troublé, Manu Prakash, Colomban de Vargas, Fabien Lombard
Publikováno v:
Frontiers in Marine Science
Frontiers in Marine Science, 2022, 9, ⟨10.3389/fmars.2022.916025⟩
Frontiers in Marine Science, 2022, 9, ⟨10.3389/fmars.2022.916025⟩
World ocean plankton quantitative biodiversity data are still severely limited due to the high cost and logistical constraints associated to oceanographic vessels and collection/analytic devices. Here, we report the first use of an affordable and ope
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e76763d6ac364f53789d32a0652b1f45
https://hal.science/hal-03877194
https://hal.science/hal-03877194
Autor:
Tom O. Delmont, Morgan Gaia, Damien D. Hinsinger, Paul Frémont, Chiara Vanni, Antonio Fernandez-Guerra, A. Murat Eren, Artem Kourlaiev, Leo d'Agata, Quentin Clayssen, Emilie Villar, Karine Labadie, Corinne Cruaud, Julie Poulain, Corinne Da Silva, Marc Wessner, Benjamin Noel, Jean-Marc Aury, Colomban de Vargas, Chris Bowler, Eric Karsenti, Eric Pelletier, Patrick Wincker, Olivier Jaillon, Shinichi Sunagawa, Silvia G. Acinas, Peer Bork, Christian Sardet, Lars Stemmann, Magali Lescot, Marcel Babin, Gabriel Gorsky, Nigel Grimsley, Lionel Guidi, Pascal Hingamp, Stefanie Kandels, Daniele Iudicone, Hiroyuki Ogata, Stéphane Pesant, Matthew B. Sullivan, Fabrice Not, Karp-Boss Lee, Emmanuel Boss, Guy Cochrane, Michael Follows, Nicole Poulton, Jeroen Raes, Mike Sieracki, Sabrina Speich
Publikováno v:
Cell Genomics
Cell Genomics, 2022, 2 (5), pp.100123. ⟨10.1016/j.xgen.2022.100123⟩
Delmont, T O, Gaia, M, Hinsinger, D D, Frémont, P, Vanni, C, Fernandez-Guerra, A, Eren, A M, Kourlaiev, A, d'Agata, L, Clayssen, Q, Villar, E, Labadie, K, Cruaud, C, Poulain, J, Da Silva, C, Wessner, M, Noel, B, Aury, J-M, Sunagawa, S, Acinas, S G, Bork, P, Karsenti, E, Bowler, C, Sardet, C, Stemmann, L, de Vargas, C, Wincker, P, Lescot, M, Babin, M, Gorsky, G, Grimsley, N, Guidi, L, Hingamp, P, Jaillon, O, Kandels, S, Iudicone, D, Ogata, H, Pesant, S, Sullivan, M B, Not, F, Lee, K B, Boss, E, Cochrane, G, Follows, M, Poulton, N, Raes, J, Sieracki, M, Speich, S, Pelletier, E & Tara Oceans Coordinators 2022, ' Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean ', Cell Genomics, vol. 2, no. 5, 100123 . https://doi.org/10.1016/j.xgen.2022.100123
Cell Genomics, 2022, 2 (5), pp.100123. ⟨10.1016/j.xgen.2022.100123⟩
Delmont, T O, Gaia, M, Hinsinger, D D, Frémont, P, Vanni, C, Fernandez-Guerra, A, Eren, A M, Kourlaiev, A, d'Agata, L, Clayssen, Q, Villar, E, Labadie, K, Cruaud, C, Poulain, J, Da Silva, C, Wessner, M, Noel, B, Aury, J-M, Sunagawa, S, Acinas, S G, Bork, P, Karsenti, E, Bowler, C, Sardet, C, Stemmann, L, de Vargas, C, Wincker, P, Lescot, M, Babin, M, Gorsky, G, Grimsley, N, Guidi, L, Hingamp, P, Jaillon, O, Kandels, S, Iudicone, D, Ogata, H, Pesant, S, Sullivan, M B, Not, F, Lee, K B, Boss, E, Cochrane, G, Follows, M, Poulton, N, Raes, J, Sieracki, M, Speich, S, Pelletier, E & Tara Oceans Coordinators 2022, ' Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean ', Cell Genomics, vol. 2, no. 5, 100123 . https://doi.org/10.1016/j.xgen.2022.100123
18 pages, 4 figures, supplemental information https://doi.org/10.1016/j.xgen.2022.100123.-- Data and code availability: • All data our study generated are publicly available at http://www.genoscope.cns.fr/tara/. The link provides access to the 11 r
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::28f9a5df54ad5a1d81187d4840fc3382
https://hal.science/hal-03872935
https://hal.science/hal-03872935
Autor:
Ahmed A, Zayed, James M, Wainaina, Guillermo, Dominguez-Huerta, Eric, Pelletier, Jiarong, Guo, Mohamed, Mohssen, Funing, Tian, Akbar Adjie, Pratama, Benjamin, Bolduc, Olivier, Zablocki, Dylan, Cronin, Lindsey, Solden, Erwan, Delage, Adriana, Alberti, Jean-Marc, Aury, Quentin, Carradec, Corinne, da Silva, Karine, Labadie, Julie, Poulain, Hans-Joachim, Ruscheweyh, Guillem, Salazar, Elan, Shatoff, Ralf, Bundschuh, Kurt, Fredrick, Laura S, Kubatko, Samuel, Chaffron, Alexander I, Culley, Shinichi, Sunagawa, Jens H, Kuhn, Patrick, Wincker, Matthew B, Sullivan, Silvia G, Acinas, Marcel, Babin, Peer, Bork, Emmanuel, Boss, Chris, Bowler, Guy, Cochrane, Colomban, de Vargas, Gabriel, Gorsky, Lionel, Guidi, Nigel, Grimsley, Pascal, Hingamp, Daniele, Iudicone, Olivier, Jaillon, Stefanie, Kandels, Lee, Karp-Boss, Eric, Karsenti, Fabrice, Not, Hiroyuki, Ogata, Nicole, Poulton, Stéphane, Pesant, Christian, Sardet, Sabrinia, Speich, Lars, Stemmann, Shinichi, Sungawa
Publikováno v:
Science
Science, 2022, 376 (6589), pp.156-162. ⟨10.1126/science.abm5847⟩
Science, 2022, 376 (6589), pp.156-162. ⟨10.1126/science.abm5847⟩
Whereas DNA viruses are known to be abundant, diverse, and commonly key ecosystem players, RNA viruses are insufficiently studied outside disease settings. In this study, we analyzed ≈28 terabases of Global Ocean RNA sequences to expand Earth’s R
Autor:
David Singer, Edward A. D. Mitchell, Gabriela Mataloni, Christophe V. W. Seppey, Isabelle Domaizon, M. Romina Schiaffino, David Bass, Lassâad Belbahri, Guillaume Lentendu, Stefan Geisen, Isabelle Koenig, Colomban de Vargas, G. Arjen de Groot, Quentin Blandenier, Enrique Lara, Clément Duckert, Didier Debroas, Irina Izaguirre, Micah Dunthorn
Publikováno v:
Environment International
Environment International, Elsevier, 2020, 146, pp.106262. ⟨10.1016/j.envint.2020.106262⟩
Environment International, Elsevier, 2021, 146, pp.106262. ⟨10.1016/j.envint.2020.106262⟩
Environment International, Vol 146, Iss, Pp 106262-(2021)
Digital.CSIC. Repositorio Institucional del CSIC
instname
CONICET Digital (CONICET)
Consejo Nacional de Investigaciones Científicas y Técnicas
instacron:CONICET
Environment International 146 (2021)
Environment International, 146
Environment International, 2021, 146, pp.106262. ⟨10.1016/j.envint.2020.106262⟩
Environment International, Elsevier, 2020, 146, pp.106262. ⟨10.1016/j.envint.2020.106262⟩
Environment International, Elsevier, 2021, 146, pp.106262. ⟨10.1016/j.envint.2020.106262⟩
Environment International, Vol 146, Iss, Pp 106262-(2021)
Digital.CSIC. Repositorio Institucional del CSIC
instname
CONICET Digital (CONICET)
Consejo Nacional de Investigaciones Científicas y Técnicas
instacron:CONICET
Environment International 146 (2021)
Environment International, 146
Environment International, 2021, 146, pp.106262. ⟨10.1016/j.envint.2020.106262⟩
Protists dominate eukaryotic diversity and play key functional roles in all ecosystems, particularly by catalyzing carbon and nutrient cycling. To date, however, a comparative analysis of their taxonomic and functional diversity that compares the maj
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::704f4b826b2f33ab9605d043364e9527
https://hdl.handle.net/10037/20292
https://hdl.handle.net/10037/20292
Autor:
Stéphane Audic, Daniel J. Richter, Colomban de Vargas, Xavier Pochon, Cédric Berney, Johan Decelle, Solenn Mordret, Sébastien Colin, Nicolas Henry, Sarah Romac, Margaux Carmichael
Publikováno v:
ISME Journal
ISME Journal, Nature Publishing Group, 2016, 10 (6), pp.1424-1436. ⟨10.1038/ismej.2015.211⟩
ISME Journal, 2016, 10 (6), pp.1424-1436. ⟨10.1038/ismej.2015.211⟩
Europe PubMed Central
ISME Journal, Nature Publishing Group, 2016, 10 (6), pp.1424-1436. ⟨10.1038/ismej.2015.211⟩
ISME Journal, 2016, 10 (6), pp.1424-1436. ⟨10.1038/ismej.2015.211⟩
Europe PubMed Central
International audience; Symbiotic partnerships between heterotrophic hosts and intracellular microalgae are common in tropical and subtropical oligotrophic waters of benthic and pelagic marine habitats. The iconic example is the photosynthetic dinofl
Publikováno v:
Journal of Applied Phycology
Journal of Applied Phycology, Springer Verlag, 2013, 25 (6), pp.1763-1776. ⟨10.1007/s10811-013-0037-0⟩
Journal of Applied Phycology, 2013, 25 (6), pp.1763-1776. ⟨10.1007/s10811-013-0037-0⟩
Journal of Applied Phycology, Springer Verlag, 2013, 25 (6), pp.1763-1776. ⟨10.1007/s10811-013-0037-0⟩
Journal of Applied Phycology, 2013, 25 (6), pp.1763-1776. ⟨10.1007/s10811-013-0037-0⟩
International audience; The Isochrysidaceae is a family of non-calcifying organisms within the haptophyte order Isochrysidales. Isochrysis galbana, a species widely used as a food source in aquaculture, is the best-known representative of this family
Autor:
Finlay Maguire, Meredith D. M. Jones, Frédéric Mahé, Micah Dunthorn, Colomban de Vargas, Aurélie Chambouvet, Thomas A. Richards, Guy Leonard, Ramon Massana, Javier del Campo, Sarah Romac
Publikováno v:
Proceedings Of The Royal Society B-biological Sciences (0962-8452) (Royal Soc), 2015-11, Vol. 282, N. 1819, P. 1-10
Proceedings of the Royal Society B: Biological Sciences
Proceedings of the Royal Society B: Biological Sciences, 2015, 282 (1819), pp.20152243. ⟨10.1098/rspb.2015.2243⟩
Proceedings of the Royal Society B: Biological Sciences, Royal Society, The, 2015, 282 (1819), pp.20152243. ⟨10.1098/rspb.2015.2243⟩
Digital.CSIC. Repositorio Institucional del CSIC
instname
Proceedings of the Royal Society B: Biological Sciences
Proceedings of the Royal Society B: Biological Sciences, 2015, 282 (1819), pp.20152243. ⟨10.1098/rspb.2015.2243⟩
Proceedings of the Royal Society B: Biological Sciences, Royal Society, The, 2015, 282 (1819), pp.20152243. ⟨10.1098/rspb.2015.2243⟩
Digital.CSIC. Repositorio Institucional del CSIC
instname
Richards, Thomas A. ... et. al.-- 10 pages, 5 figures, 1 table, electronic supplementary material https://royalsocietypublishing.org/doi/suppl/10.1098/rspb.2015.2243
Environmental DNA and culture-based analyses have suggested that fungi are pres
Environmental DNA and culture-based analyses have suggested that fungi are pres
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::80bb43a1ef57d330428da1e2445eff66
http://hdl.handle.net/10261/126982
http://hdl.handle.net/10261/126982
Autor:
Jean-Marc Aury, Daniele Iudicone, Hiroyuki Ogata, Stéphane Audic, Frédéric Mahé, Fabrice Not, Johan Decelle, Gabriel Gorsky, Silvia G. Acinas, Pascal Hingamp, Sarah Romac, Noan Le Bescot, Matthieu Mulot, Sébastien Colin, Eleonora Scalco, Michael E. Sieracki, Marc Picheral, Tara Oceans Coordinators, Nicolas Henry, Stephane Pesant, Micah Dunthorn, Adriana Zingone, Sabrina Speich, Margaux Carmichael, Chris Bowler, Sarah Searson, Céline Dimier, Jeroen Raes, Gipsi Lima-Mendez, Shruti Malviya, Aleš Horák, Eric Karsenti, Ramiro Logares, Olga Flegontova, Julius Lukeš, Shinichi Sunagawa, Flora Vincent, Stefanie Kandels-Lewis, Enrique Lara, Raphael Morard, Stefan Engelen, Peer Bork, Patrick Wincker, Colomban de Vargas, Raffaele Siano, Ian Probert, Jean Weissenbach, Lars Stemmann, Cédric Berney, Samuel Chaffron, Olivier Jaillon, Lionel Guidi, Julie Poulain, Lucie Bittner, Nigel Grimsley
Publikováno v:
Science
Science, 2015, 348 (6237), pp.1261605. ⟨10.1126/science.1261605⟩
Science, American Association for the Advancement of Science, 2015, 348 (6237), pp.1261605. 〈10.1126/science.1261605〉
Science, Vol. 348, no.6237, p. 1261605-1261605 (2015)
Digital.CSIC. Repositorio Institucional del CSIC
instname
Science (0036-8075) (Amer Assoc Advancement Science), 2015-05, Vol. 348, N. 6237, P. 1-12
Science, American Association for the Advancement of Science, 2015, 348 (6237), pp.1261605. ⟨10.1126/science.1261605⟩
ArchiMer-Institutional Archive of Ifremer
RERO DOC Digital Library
Science, 2015, 348 (6237), pp.1261605. ⟨10.1126/science.1261605⟩
Science, American Association for the Advancement of Science, 2015, 348 (6237), pp.1261605. 〈10.1126/science.1261605〉
Science, Vol. 348, no.6237, p. 1261605-1261605 (2015)
Digital.CSIC. Repositorio Institucional del CSIC
instname
Science (0036-8075) (Amer Assoc Advancement Science), 2015-05, Vol. 348, N. 6237, P. 1-12
Science, American Association for the Advancement of Science, 2015, 348 (6237), pp.1261605. ⟨10.1126/science.1261605⟩
ArchiMer-Institutional Archive of Ifremer
RERO DOC Digital Library
Vargas, Colomban de ... et. al.-- 11 pages, 7 figures, supplementary materials www.sciencemag.org/content/348/6237/1261605/suppl/DC1
Marine plankton support global biological and geochemical processes. Surveys of their biodiversity have hitherto
Marine plankton support global biological and geochemical processes. Surveys of their biodiversity have hitherto
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::689606d9b22d044936226d4481efe8bc
http://www.vliz.be/nl/open-marien-archief?module=ref&refid=247193
http://www.vliz.be/nl/open-marien-archief?module=ref&refid=247193
Publikováno v:
Cryptogamie Algologie
Cryptogamie Algologie, BioOne, 2014, 35 (4), pp.353-377. ⟨10.7872/crya.v35.iss4.2014.353⟩
Cryptogamie Algologie, 2014, 35 (4), pp.353-377. ⟨10.7872/crya.v35.iss4.2014.353⟩
Cryptogamie Algologie, BioOne, 2014, 35 (4), pp.353-377. ⟨10.7872/crya.v35.iss4.2014.353⟩
Cryptogamie Algologie, 2014, 35 (4), pp.353-377. ⟨10.7872/crya.v35.iss4.2014.353⟩
International audience; Genetic approaches to exploring in situ marine phytoplankton assemblages have revealed previously unsuspected diversity at different taxonomic levels. However, the phylogenetic species concept has rarely been compared to class
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::642279bc5ef8ca74a1bc2fe38d1ba114
https://hal.archives-ouvertes.fr/hal-01258220
https://hal.archives-ouvertes.fr/hal-01258220
Autor:
Frédéric Quillévéré, Colomban de Vargas, Raphael Morard, Aurore André, Gilles Escarguel, Yurika Ujiié, Christophe J. Douady, Thibault de Garidel-Thoron
Publikováno v:
Plos One (1932-6203) (Public Library Science), 2014-08-13, Vol. 9, N. 8, P. 1-19
PLoS ONE
PLoS ONE, Public Library of Science, 2014, 9 (8), pp.e104641. ⟨10.1371/journal.pone.0104641⟩
PLoS ONE, 2014, 9 (8), pp.e104641. ⟨10.1371/journal.pone.0104641⟩
PLoS ONE, Vol 9, Iss 8, p e104641 (2014)
PLoS ONE
PLoS ONE, Public Library of Science, 2014, 9 (8), pp.e104641. ⟨10.1371/journal.pone.0104641⟩
PLoS ONE, 2014, 9 (8), pp.e104641. ⟨10.1371/journal.pone.0104641⟩
PLoS ONE, Vol 9, Iss 8, p e104641 (2014)
International audience; The use of planktonic foraminifera in paleoceanography requires taxonomic consistency and precise assessment of the species biogeography. Yet, ribosomal small subunit (SSUr) DNA analyses have revealed that most of the modern m
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8e88578a63f836ae84e469e8913e3d39
https://archimer.ifremer.fr/doc/00290/40107/
https://archimer.ifremer.fr/doc/00290/40107/