Zobrazeno 1 - 6
of 6
pro vyhledávání: '"John M. Hickey"'
Autor:
Janez Jenko, Steve Thorn, John M. Hickey, David C. Wilson, Gregor Gorjanc, Daniel Money, Andrew Whalen
Publikováno v:
Genetics Selection Evolution
Genetics Selection Evolution, BioMed Central, 2020, 52 (1), pp.38. ⟨10.1186/s12711-020-00558-2⟩
Money, D, Wilson, D, Jenko, J, Whalen, A, Thorn, S, Gorjanc, G & Hickey, J M 2020, ' Extending long-range phasing and haplotype library imputation algorithms to large and heterogeneous datasets ', Genetics Selection Evolution, vol. 52, no. 1, pp. 38 . https://doi.org/10.1186/s12711-020-00558-2
Genetics, Selection, Evolution : GSE
Genetics Selection Evolution, Vol 52, Iss 1, Pp 1-12 (2020)
Genetics Selection Evolution, BioMed Central, 2020, 52 (1), pp.38. ⟨10.1186/s12711-020-00558-2⟩
Money, D, Wilson, D, Jenko, J, Whalen, A, Thorn, S, Gorjanc, G & Hickey, J M 2020, ' Extending long-range phasing and haplotype library imputation algorithms to large and heterogeneous datasets ', Genetics Selection Evolution, vol. 52, no. 1, pp. 38 . https://doi.org/10.1186/s12711-020-00558-2
Genetics, Selection, Evolution : GSE
Genetics Selection Evolution, Vol 52, Iss 1, Pp 1-12 (2020)
BACKGROUND: We describe the latest improvements to the long-range phasing (LRP) and haplotype library imputation (HLI) algorithms for successful phasing of both datasets with one million individuals and datasets genotyped using different sets of sing
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cb3c5266a64569ab08c81a7a4c888fb4
https://hal.archives-ouvertes.fr/hal-02897831/document
https://hal.archives-ouvertes.fr/hal-02897831/document
Publikováno v:
Genetics Selection Evolution
Genetics Selection Evolution, BioMed Central, 2020, 52 (1), pp.18. ⟨10.1186/s12711-020-00537-7⟩
Repositorio Abierto de la UdL
Universitad de Lleida
Ros-Freixedes, R, Whalen, A, Gorjanc, G, Mileham, A J & Hickey, J 2020, ' Evaluation of sequencing strategies for whole-genome imputation with hybrid peeling ', Genetics Selection Evolution . https://doi.org/10.1186/s12711-020-00537-7
Recercat: Dipósit de la Recerca de Catalunya
Varias* (Consorci de Biblioteques Universitáries de Catalunya, Centre de Serveis Científics i Acadèmics de Catalunya)
Genetics Selection Evolution, Vol 52, Iss 1, Pp 1-19 (2020)
Genetics, Selection, Evolution : GSE
Recercat. Dipósit de la Recerca de Catalunya
instname
Genetics Selection Evolution, BioMed Central, 2020, 52 (1), pp.18. ⟨10.1186/s12711-020-00537-7⟩
Repositorio Abierto de la UdL
Universitad de Lleida
Ros-Freixedes, R, Whalen, A, Gorjanc, G, Mileham, A J & Hickey, J 2020, ' Evaluation of sequencing strategies for whole-genome imputation with hybrid peeling ', Genetics Selection Evolution . https://doi.org/10.1186/s12711-020-00537-7
Recercat: Dipósit de la Recerca de Catalunya
Varias* (Consorci de Biblioteques Universitáries de Catalunya, Centre de Serveis Científics i Acadèmics de Catalunya)
Genetics Selection Evolution, Vol 52, Iss 1, Pp 1-19 (2020)
Genetics, Selection, Evolution : GSE
Recercat. Dipósit de la Recerca de Catalunya
instname
Background For assembling large whole-genome sequence datasets for routine use in research and breeding, the sequencing strategy should be adapted to the methods that will be used later for variant discovery and imputation. In this study, we used sim
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e7fb32fd0d117ad30651a8d53ca06a25
https://hal.archives-ouvertes.fr/hal-02541155/document
https://hal.archives-ouvertes.fr/hal-02541155/document
Autor:
Janez Jenko, Matthew C. McClure, Daragh Matthews, Jennifer McClure, Martin Johnsson, Gregor Gorjanc, John M. Hickey
Publikováno v:
Genetics Selection Evolution
Genetics Selection Evolution, BioMed Central, 2019, 51 (1), pp.9. ⟨10.1186/s12711-019-0452-z⟩
Genetics, Selection, Evolution : GSE
Jenko, J, McClure, M C, Matthews, D, McClure, J, Johnsson, M, Gorjanc, G & Hickey, J 2019, ' Analysis of a large dataset reveals haplotypes carrying putatively recessive lethal and semi-lethal alleles with pleiotropic effects on economically important traits in beef cattle ', Genetics Selection Evolution, vol. 51, no. 9, 9, pp. 1-14 . https://doi.org/10.1186/s12711-019-0452-z
Genetics Selection Evolution, Vol 51, Iss 1, Pp 1-14 (2019)
Genetics Selection Evolution, BioMed Central, 2019, 51 (1), pp.9. ⟨10.1186/s12711-019-0452-z⟩
Genetics, Selection, Evolution : GSE
Jenko, J, McClure, M C, Matthews, D, McClure, J, Johnsson, M, Gorjanc, G & Hickey, J 2019, ' Analysis of a large dataset reveals haplotypes carrying putatively recessive lethal and semi-lethal alleles with pleiotropic effects on economically important traits in beef cattle ', Genetics Selection Evolution, vol. 51, no. 9, 9, pp. 1-14 . https://doi.org/10.1186/s12711-019-0452-z
Genetics Selection Evolution, Vol 51, Iss 1, Pp 1-14 (2019)
Background In livestock, deleterious recessive alleles can result in reduced economic performance of homozygous individuals in multiple ways, e.g. early embryonic death, death soon after birth, or semi-lethality with incomplete penetrance causing red
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::e4a0e1db240d7c838ecd00e45960818f
https://hal.archives-ouvertes.fr/hal-02502140/file/12711_2019_Article_452.pdf
https://hal.archives-ouvertes.fr/hal-02502140/file/12711_2019_Article_452.pdf
Autor:
Martin Johnsson, John M. Hickey, Janez Jenko, Gregor Gorjanc, Dirk-Jan de Koning, R. Chris Gaynor
Publikováno v:
Genetics Selection Evolution
Genetics Selection Evolution, BioMed Central, 2019, 51 (1), pp.14. ⟨10.1186/s12711-019-0456-8⟩
Genetics, Selection, Evolution : GSE
Johnsson, M, Gaynor, R, Jenko, J, Gorjanc, G, De Koning, D-J & Hickey, J 2019, ' Removal of alleles by genome editing (RAGE) against deleterious load ', Genetics Selection Evolution . https://doi.org/10.1186/s12711-019-0456-8
Genetics Selection Evolution, Vol 51, Iss 1, Pp 1-18 (2019)
Genetics Selection Evolution, BioMed Central, 2019, 51 (1), pp.14. ⟨10.1186/s12711-019-0456-8⟩
Genetics, Selection, Evolution : GSE
Johnsson, M, Gaynor, R, Jenko, J, Gorjanc, G, De Koning, D-J & Hickey, J 2019, ' Removal of alleles by genome editing (RAGE) against deleterious load ', Genetics Selection Evolution . https://doi.org/10.1186/s12711-019-0456-8
Genetics Selection Evolution, Vol 51, Iss 1, Pp 1-18 (2019)
Background In this paper, we simulate deleterious load in an animal breeding program, and compare the efficiency of genome editing and selection for decreasing it. Deleterious variants can be identified by bioinformatics screening methods that use se
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::80f57ea7acb8fe1ea3f6fd06fc58f86d
https://hal.archives-ouvertes.fr/hal-02105889/file/12711_2019_456_MOESM1_ESM.pdf
https://hal.archives-ouvertes.fr/hal-02105889/file/12711_2019_456_MOESM1_ESM.pdf
Publikováno v:
Genetics Selection Evolution
Genetics Selection Evolution, BioMed Central, 2017, 49 (1), pp.55. ⟨10.1186/s12711-017-0330-5⟩
Genetics Selection Evolution, Vol 49, Iss 1, Pp 1-12 (2017)
Gonen, S, Battagin, M, Johnston, S, Gorjanc, G & Hickey, J 2017, ' The potential of shifting recombination hotspots to increase genetic gain in livestock breeding ', Genetics Selection Evolution, vol. 49, no. 1, 55 . https://doi.org/10.1186/s12711-017-0330-5
Genetics, Selection, Evolution : GSE
Genetics Selection Evolution, BioMed Central, 2017, 49 (1), pp.55. ⟨10.1186/s12711-017-0330-5⟩
Genetics Selection Evolution, Vol 49, Iss 1, Pp 1-12 (2017)
Gonen, S, Battagin, M, Johnston, S, Gorjanc, G & Hickey, J 2017, ' The potential of shifting recombination hotspots to increase genetic gain in livestock breeding ', Genetics Selection Evolution, vol. 49, no. 1, 55 . https://doi.org/10.1186/s12711-017-0330-5
Genetics, Selection, Evolution : GSE
Background This study uses simulation to explore and quantify the potential effect of shifting recombination hotspots on genetic gain in livestock breeding programs. Methods We simulated three scenarios that differed in the locations of quantitative
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::8becd1fe04494eacc830c6612b735e8c
https://hal.archives-ouvertes.fr/hal-01556265/file/12711_2017_Article_330.pdf
https://hal.archives-ouvertes.fr/hal-01556265/file/12711_2017_Article_330.pdf
Publikováno v:
Genetics Selection Evolution
Genetics Selection Evolution, 2015, 47 (1), pp.65. ⟨10.1186/s12711-015-0145-1⟩
Gorjanc, G, Bijma, P & Hickey, J M 2015, ' Reliability of pedigree-based and genomic evaluations in selected populations ', Genetics Selection Evolution, vol. 47, no. 1, pp. 65 . https://doi.org/10.1186/s12711-015-0145-1
Genetics, Selection, Evolution 47 (2015)
Genetics, Selection, Evolution, 47
Genetics, Selection, Evolution : GSE
Genetics Selection Evolution, 2015, 47 (1), pp.65. ⟨10.1186/s12711-015-0145-1⟩
Gorjanc, G, Bijma, P & Hickey, J M 2015, ' Reliability of pedigree-based and genomic evaluations in selected populations ', Genetics Selection Evolution, vol. 47, no. 1, pp. 65 . https://doi.org/10.1186/s12711-015-0145-1
Genetics, Selection, Evolution 47 (2015)
Genetics, Selection, Evolution, 47
Genetics, Selection, Evolution : GSE
Background Reliability is an important parameter in breeding. It measures the precision of estimated breeding values (EBV) and, thus, potential response to selection on those EBV. The precision of EBV is commonly measured by relating the prediction e
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d71f015806ac3966cee91e8caca35d92
https://hal.archives-ouvertes.fr/hal-01341303/file/12711_2015_Article_145.pdf
https://hal.archives-ouvertes.fr/hal-01341303/file/12711_2015_Article_145.pdf