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Autor:
Mary M. Leeman, Michael R. Oliver, Rachel A. North, Austin J. Bartl, Müge Kasanmascheff, Renwick C. J. Dobson, Hironori Suzuki, Michael D. W. Griffin, Katherine A. Donovan, André O. Hudson, Jennifer M. Crowther, Penelope J. Cross
Publikováno v:
Crowther, J M, Cross, P J, Oliver, M R, Leeman, M M, Bartl, A J, Weatherhead, A W, North, R A, Donovan, K A, Griffin, M D W, Suzuki, H, Hudson, A O, Kasanmascheff, M & Dobson, R C J 2019, ' Structure–function analyses of two plant meso-diaminopimelate decarboxylase isoforms reveal that active-site gating provides stereochemical control ', Journal of Biological Chemistry, vol. 294, no. 21, pp. 8505-8515 . https://doi.org/10.1074/jbc.RA118.006825
J Biol Chem
J Biol Chem
meso-Diaminopimelate decarboxylase catalyzes the decarboxylation of meso-diaminopimelate, the final reaction in the diaminopimelate l-lysine biosynthetic pathway. It is the only known pyridoxal-5-phosphate–dependent decarboxylase that catalyzes the
Autor:
Kirk A. Vander Meulen, Daniel R. Noguera, Wayne S. Kontur, Daniel L. Gall, Kevin A. Walters, Timothy J. Donohue, Charles N. Olmsted, Steven D. Karlen, Emily T. Beebe, Larissa M. Yusko, Alyssa V. Niles
Publikováno v:
Journal of Biological Chemistry. 294:1877-1890
Lignin is a heterogeneous polymer of aromatic subunits that is a major component of lignocellulosic plant biomass. Understanding how microorganisms deconstruct lignin is important for understanding the global carbon cycle and could aid in developing
Autor:
Jeppe Kari, Trine Holst Sørensen, Kenneth Jensen, Kim Borch, Nanna Sandager Røjel, Peter Westh, Corinna Schiano-di-Cola
Publikováno v:
Schiano-de-Cola, C, Røjel, N, Jensen, K, Kari, J, Sørensen, T H, Borch, K & Westh, P 2019, ' Systematic deletions in the cellobiohydrolase (CBH) Cel7A from the fungus Trichoderma reesei reveal flexible loops critical for CBH activity ', Journal of Biological Chemistry, vol. 294, no. 6, pp. 1807-1815 . https://doi.org/10.1074/jbc.RA118.006699
Glycoside hydrolase family 7 (GH7) cellulases are some of the most efficient degraders of cellulose, making them particularly relevant for industries seeking to produce renewable fuels from lignocellulosic biomass. The secretome of the cellulolytic m
Autor:
Mehmet Karabel, Klaus Fendler, Miyer Patiño-Ruiz, Etana Padan, Octavian Călinescu, Manish Dwivedi
Publikováno v:
Journal of Biological Chemistry. 294:246-256
Much of the research on Na+/H+ exchange has been done in prokaryotic models, mainly on the NhaA Na+/H+-exchanger from Escherichia coli (EcNhaA). Two conserved aspartate residues, Asp-163 and Asp-164, are essential for transport and are candidates for
Autor:
Hideaki Tsuge, Toru Yoshida
Publikováno v:
Journal of Biological Chemistry. 293:13768-13774
ScARP from the bacterium Streptomyces coelicolor belongs to the pierisin family of DNA-targeting ADP-ribosyltransferases (ARTs). These enzymes ADP-ribosylate the N(2) amino groups of guanine residues in DNA to yield N(2)-(ADP-ribos-1-yl)-2′-deoxygu
Autor:
Kentaro Shimizu, Shinya Fushinobu, Chihaya Yamada, Motomitsu Kitaoka, Akihiro Ishiwata, Kiyotaka Fujita, Takatoshi Arakawa, Kouki Okumura, Yukishige Ito, Toma Kashima, Tohru Terada, Katsunori Tanaka, Machika Kaieda
Publikováno v:
The Journal of Biological Chemistry
Fructooligosaccharides and their anhydrides are widely used as health-promoting foods and prebiotics. Various enzymes acting on β-D-fructofuranosyl linkages of natural fructan polymers have been used to produce functional compounds. However, enzymes
Publikováno v:
Journal of Biological Chemistry. 293:11746-11757
β-1,4-Mannanase degrades β-1,4-mannan polymers into manno-oligosaccharides with a low degree of polymerization. To date, only one glycoside hydrolase (GH) family 113 β-1,4-mannanase, from Alicyclobacillus acidocaldarius (AaManA), has been structur
Autor:
Zia Fatma, Dinesh C. Gupta, Medha Sharma, Syed Shams Yazdani, Tasneem Fatma, Rahul Singh, Tabinda Shakeel, Rakesh Kumar, Dhananjay Jade, Raubins Kumar, Mayank Gupta
Publikováno v:
Journal of Biological Chemistry. 293:9148-9161
Aldehyde-deformylating oxygenase (ADO) is an essential enzyme for production of long-chain alkanes as drop-in biofuels, which are compatible with existing fuel systems. The most active ADOs are present in mesophilic cyanobacteria, especially Nostoc p
Publikováno v:
Journal of Biological Chemistry. 293:6859-6868
Several oxime-containing small molecules have useful properties, including antimicrobial, insecticidal, anticancer, and immunosuppressive activities. Phosphonocystoximate and its hydroxylated congener, hydroxyphosphonocystoximate, are recently discov
Publikováno v:
Journal of Biological Chemistry. 293:4680-4687
The inverting glycoside hydrolase Trichoderma reesei (Hypocrea jecorina) Cel6A is a promising candidate for protein engineering for more economical production of biofuels. Until recently, its catalytic mechanism had been uncertain: The best candidate